Blast4-value
Defined in file blast.asn
C++ class: CBlast4_value
Blast4-value ::= CHOICE {
-- scalar types
big-integer BigInt,
bioseq Bioseq,
boolean BOOLEAN,
cutoff Blast4-cutoff,
integer INTEGER,
matrix PssmWithParameters,
real REAL,
seq-align Seq-align,
seq-id Seq-id,
seq-loc Seq-loc,
strand-type Blast4-strand-type,
string VisibleString,
-- lists of scalar types
big-integer-list SEQUENCE OF BigInt,
bioseq-list SEQUENCE OF Bioseq,
boolean-list SEQUENCE OF BOOLEAN,
cutoff-list SEQUENCE OF Blast4-cutoff,
integer-list SEQUENCE OF INTEGER,
matrix-list SEQUENCE OF PssmWithParameters,
real-list SEQUENCE OF REAL,
seq-align-list SEQUENCE OF Seq-align,
seq-id-list SEQUENCE OF Seq-id,
seq-loc-list SEQUENCE OF Seq-loc,
strand-type-list SEQUENCE OF Blast4-strand-type,
string-list SEQUENCE OF VisibleString,
-- imported collection types
bioseq-set Bioseq-set,
seq-align-set Seq-align-set,
-- Intended to represent user-provided masking locations for a single query
-- sequence (name field in Blast4-parameter should be "LCaseMask").
-- Multiple Blast4-parameters of this type are needed to specify masking
-- locations for multiple queries.
query-mask Blast4-mask
}