Defines CBlastScopeSource class to create properly configured CScope objects. More...
#include <ncbi_pch.hpp>#include <algo/blast/blastinput/blast_scope_src.hpp>#include <objmgr/scope.hpp>#include <objmgr/object_manager.hpp>#include <objtools/data_loaders/genbank/gbloader.hpp>#include <objtools/data_loaders/blastdb/bdbloader_rmt.hpp>#include <objtools/data_loaders/genbank/id2/reader_id2.hpp>
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Functions | |
| USING_SCOPE (objects) | |
| static int | s_CountBlastDbDataLoaders () |
| Counts the number of BLAST database data loaders registered in the object manager. More... | |
Detailed Description
Defines CBlastScopeSource class to create properly configured CScope objects.
Definition in file blast_scope_src.cpp.
Function Documentation
◆ s_CountBlastDbDataLoaders()
Counts the number of BLAST database data loaders registered in the object manager.
This is needed so that the priorities of the BLAST databases can be adjusted accordingly when multiple BLAST database data loaders are added to CScope objects (
- See also
- AddDataLoaders)
Definition at line 276 of file blast_scope_src.cpp.
References NStr::Find(), CObjectManager::GetInstance(), CObjectManager::GetRegisteredNames(), CThread::GetSelf(), NStr::IntToString(), ITERATE, kPrefix, kPrefixThread, and NPOS.
Referenced by CBlastScopeSource::AddDataLoaders().
◆ USING_SCOPE()
| USING_SCOPE | ( | objects | ) |
