NCBI C++ ToolKit
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Search Toolkit Book for CFlatGoQVal
#include <objtools/format/items/qualifiers.hpp>
Public Member Functions | |
CFlatGoQVal (const CUser_field &value) | |
void | Format (TFlatQuals &quals, const CTempString &name, CBioseqContext &ctx, TFlags flags) const |
bool | Equals (const CFlatGoQVal &rhs) const |
const string & | GetTextString (void) const |
int | GetPubmedId (void) const |
Public Member Functions inherited from CObject | |
CObject (void) | |
Constructor. More... | |
CObject (const CObject &src) | |
Copy constructor. More... | |
virtual | ~CObject (void) |
Destructor. More... | |
CObject & | operator= (const CObject &src) THROWS_NONE |
Assignment operator. More... | |
bool | CanBeDeleted (void) const THROWS_NONE |
Check if object can be deleted. More... | |
bool | IsAllocatedInPool (void) const THROWS_NONE |
Check if object is allocated in memory pool (not system heap) More... | |
bool | Referenced (void) const THROWS_NONE |
Check if object is referenced. More... | |
bool | ReferencedOnlyOnce (void) const THROWS_NONE |
Check if object is referenced only once. More... | |
void | AddReference (void) const |
Add reference to object. More... | |
void | RemoveReference (void) const |
Remove reference to object. More... | |
void | ReleaseReference (void) const |
Remove reference without deleting object. More... | |
virtual void | DoNotDeleteThisObject (void) |
Mark this object as not allocated in heap – do not delete this object. More... | |
virtual void | DoDeleteThisObject (void) |
Mark this object as allocated in heap – object can be deleted. More... | |
void * | operator new (size_t size) |
Define new operator for memory allocation. More... | |
void * | operator new[] (size_t size) |
Define new[] operator for 'array' memory allocation. More... | |
void | operator delete (void *ptr) |
Define delete operator for memory deallocation. More... | |
void | operator delete[] (void *ptr) |
Define delete[] operator for memory deallocation. More... | |
void * | operator new (size_t size, void *place) |
Define new operator. More... | |
void | operator delete (void *ptr, void *place) |
Define delete operator. More... | |
void * | operator new (size_t size, CObjectMemoryPool *place) |
Define new operator using memory pool. More... | |
void | operator delete (void *ptr, CObjectMemoryPool *place) |
Define delete operator. More... | |
virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
Define method for dumping debug information. More... | |
Public Member Functions inherited from CDebugDumpable | |
CDebugDumpable (void) | |
virtual | ~CDebugDumpable (void) |
void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
void | DumpToConsole (void) const |
Private Attributes | |
CConstRef< CUser_field > | m_Value |
Additional Inherited Members | |
Public Types inherited from IFlatQVal | |
enum | EFlags { fIsNote = 0x1 , fIsSource = 0x2 , fAddPeriod = 0x4 , fPrependNewline = 0x8 } |
typedef int | TFlags |
Public Types inherited from CObject | |
enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
Control filling of newly allocated memory. More... | |
typedef CObjectCounterLocker | TLockerType |
Default locker type for CRef. More... | |
typedef atomic< Uint8 > | TCounter |
Counter type is CAtomiCounter. More... | |
typedef Uint8 | TCount |
Alias for value type of counter. More... | |
Static Public Member Functions inherited from CObject | |
static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
Define method to throw null pointer exception. More... | |
static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
static EAllocFillMode | GetAllocFillMode (void) |
static void | SetAllocFillMode (EAllocFillMode mode) |
static void | SetAllocFillMode (const string &value) |
Set mode from configuration parameter value. More... | |
Static Public Member Functions inherited from CDebugDumpable | |
static void | EnableDebugDump (bool on) |
Static Public Attributes inherited from IFlatQVal | |
static const string | kSemicolon = ";" |
static const string | kSemicolonEOL = ";\n" |
static const string | kComma = "," |
static const string | kEOL = "\n" |
static const string | kSpace = " " |
Static Public Attributes inherited from CObject | |
static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
Define possible object states. More... | |
static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
Heap signature was found. More... | |
static const TCount | eCounterBitsPlaceMask |
Mask for 'in heap' state flags. More... | |
static const int | eCounterStep = 1 << 2 |
Skip over the "in heap" bits. More... | |
static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
static const TCount | eCounterStateMask |
Valid object, and object in heap. More... | |
Protected Types inherited from IFlatQVal | |
typedef CFormatQual::TStyle | TStyle |
typedef CFormatQual::ETrim | ETrim |
Protected Member Functions inherited from IFlatQVal | |
IFlatQVal (const string *pfx=&kSpace, const string *sfx=&kEmptyStr) | |
TFlatQual | x_AddFQ (TFlatQuals &q, const CTempString &n, const CTempString &v, TStyle st=CFormatQual::eQuoted, CFormatQual::TFlags flags=0, ETrim trim=CFormatQual::eTrim_Normal) const |
Protected Member Functions inherited from CObject | |
virtual void | DeleteThis (void) |
Virtual method "deleting" this object. More... | |
Protected Attributes inherited from IFlatQVal | |
const string * | m_Prefix |
const string * | m_Suffix |
Definition at line 624 of file qualifiers.hpp.
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inline |
Definition at line 627 of file qualifiers.hpp.
bool CFlatGoQVal::Equals | ( | const CFlatGoQVal & | rhs | ) | const |
Definition at line 1754 of file qualifiers.cpp.
References CSerialObject::Equals(), and m_Value.
Referenced by CFeatureItem::x_AddGoQuals().
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virtual |
Implements IFlatQVal.
Definition at line 1734 of file qualifiers.cpp.
References _ASSERT, ctx, flags, CUser_field_Base::GetData(), CUser_field_Base::C_Data::IsFields(), IFlatQVal::kEOL, IFlatQVal::m_Prefix, IFlatQVal::m_Suffix, m_Value, s_GetGOText(), s_IsNote(), and IFlatQVal::x_AddFQ().
Referenced by CFeatureItem::x_AddFTableExtQuals().
int CFlatGoQVal::GetPubmedId | ( | void | ) | const |
Definition at line 1778 of file qualifiers.cpp.
References CUser_field_Base::GetData(), CUser_field::GetFieldRef(), CUser_field_Base::C_Data::GetInt(), CUser_field_Base::C_Data::IsInt(), CConstRef< C, Locker >::IsNull(), and m_Value.
Referenced by CGoQualLessThan::operator()().
Definition at line 1759 of file qualifiers.cpp.
References CUser_field_Base::GetData(), CUser_field::GetFieldRef(), CUser_field_Base::C_Data::GetStr(), CConstRef< C, Locker >::IsNull(), CUser_field_Base::C_Data::IsStr(), kEmptyStr, and m_Value.
Referenced by CGoQualLessThan::operator()().
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private |
Definition at line 637 of file qualifiers.hpp.
Referenced by Equals(), Format(), GetPubmedId(), and GetTextString().