CRs Class Reference

Represents ASN.1 type Rs defined in file docsum.asn

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CRs –. More...

#include <objects/docsum/Rs.hpp>

Inheritance diagram for CRs:

Collaboration diagram for CRs:

Public Member Functions
	CRs (void)
	~CRs (void)
Public Member Functions inherited from CRs_Base
	CRs_Base (void)
virtual	~CRs_Base (void)
	DECLARE_INTERNAL_TYPE_INFO ()
bool	IsSetAttlist (void) const
	Check if a value has been assigned to Attlist data member. More...
bool	CanGetAttlist (void) const
	Check if it is safe to call GetAttlist method. More...
void	ResetAttlist (void)
	Reset Attlist data member. More...
const TAttlist &	GetAttlist (void) const
	Get the Attlist member data. More...
void	SetAttlist (TAttlist &value)
	Assign a value to Attlist data member. More...
TAttlist &	SetAttlist (void)
	Assign a value to Attlist data member. More...
bool	IsSetHet (void) const
	Check if a value has been assigned to Het data member. More...
bool	CanGetHet (void) const
	Check if it is safe to call GetHet method. More...
void	ResetHet (void)
	Reset Het data member. More...
const THet &	GetHet (void) const
	Get the Het member data. More...
void	SetHet (THet &value)
	Assign a value to Het data member. More...
THet &	SetHet (void)
	Assign a value to Het data member. More...
bool	IsSetValidation (void) const
	Check if a value has been assigned to Validation data member. More...
bool	CanGetValidation (void) const
	Check if it is safe to call GetValidation method. More...
void	ResetValidation (void)
	Reset Validation data member. More...
const TValidation &	GetValidation (void) const
	Get the Validation member data. More...
void	SetValidation (TValidation &value)
	Assign a value to Validation data member. More...
TValidation &	SetValidation (void)
	Assign a value to Validation data member. More...
bool	IsSetCreate (void) const
	Check if a value has been assigned to Create data member. More...
bool	CanGetCreate (void) const
	Check if it is safe to call GetCreate method. More...
void	ResetCreate (void)
	Reset Create data member. More...
const TCreate &	GetCreate (void) const
	Get the Create member data. More...
void	SetCreate (TCreate &value)
	Assign a value to Create data member. More...
TCreate &	SetCreate (void)
	Assign a value to Create data member. More...
bool	IsSetUpdate (void) const
	Check if a value has been assigned to Update data member. More...
bool	CanGetUpdate (void) const
	Check if it is safe to call GetUpdate method. More...
void	ResetUpdate (void)
	Reset Update data member. More...
const TUpdate &	GetUpdate (void) const
	Get the Update member data. More...
void	SetUpdate (TUpdate &value)
	Assign a value to Update data member. More...
TUpdate &	SetUpdate (void)
	Assign a value to Update data member. More...
bool	IsSetSequence (void) const
	Check if a value has been assigned to Sequence data member. More...
bool	CanGetSequence (void) const
	Check if it is safe to call GetSequence method. More...
void	ResetSequence (void)
	Reset Sequence data member. More...
const TSequence &	GetSequence (void) const
	Get the Sequence member data. More...
void	SetSequence (TSequence &value)
	Assign a value to Sequence data member. More...
TSequence &	SetSequence (void)
	Assign a value to Sequence data member. More...
bool	IsSetSs (void) const
	Check if a value has been assigned to Ss data member. More...
bool	CanGetSs (void) const
	Check if it is safe to call GetSs method. More...
void	ResetSs (void)
	Reset Ss data member. More...
const TSs &	GetSs (void) const
	Get the Ss member data. More...
TSs &	SetSs (void)
	Assign a value to Ss data member. More...
bool	IsSetAssembly (void) const
	Check if a value has been assigned to Assembly data member. More...
bool	CanGetAssembly (void) const
	Check if it is safe to call GetAssembly method. More...
void	ResetAssembly (void)
	Reset Assembly data member. More...
const TAssembly &	GetAssembly (void) const
	Get the Assembly member data. More...
TAssembly &	SetAssembly (void)
	Assign a value to Assembly data member. More...
bool	IsSetPrimarySequence (void) const
	Check if a value has been assigned to PrimarySequence data member. More...
bool	CanGetPrimarySequence (void) const
	Check if it is safe to call GetPrimarySequence method. More...
void	ResetPrimarySequence (void)
	Reset PrimarySequence data member. More...
const TPrimarySequence &	GetPrimarySequence (void) const
	Get the PrimarySequence member data. More...
TPrimarySequence &	SetPrimarySequence (void)
	Assign a value to PrimarySequence data member. More...
bool	IsSetRsStruct (void) const
	Check if a value has been assigned to RsStruct data member. More...
bool	CanGetRsStruct (void) const
	Check if it is safe to call GetRsStruct method. More...
void	ResetRsStruct (void)
	Reset RsStruct data member. More...
const TRsStruct &	GetRsStruct (void) const
	Get the RsStruct member data. More...
TRsStruct &	SetRsStruct (void)
	Assign a value to RsStruct data member. More...
bool	IsSetRsLinkout (void) const
	Check if a value has been assigned to RsLinkout data member. More...
bool	CanGetRsLinkout (void) const
	Check if it is safe to call GetRsLinkout method. More...
void	ResetRsLinkout (void)
	Reset RsLinkout data member. More...
const TRsLinkout &	GetRsLinkout (void) const
	Get the RsLinkout member data. More...
TRsLinkout &	SetRsLinkout (void)
	Assign a value to RsLinkout data member. More...
bool	IsSetMergeHistory (void) const
	Check if a value has been assigned to MergeHistory data member. More...
bool	CanGetMergeHistory (void) const
	Check if it is safe to call GetMergeHistory method. More...
void	ResetMergeHistory (void)
	Reset MergeHistory data member. More...
const TMergeHistory &	GetMergeHistory (void) const
	Get the MergeHistory member data. More...
TMergeHistory &	SetMergeHistory (void)
	Assign a value to MergeHistory data member. More...
bool	IsSetHgvs (void) const
	HGVS name list Check if a value has been assigned to Hgvs data member. More...
bool	CanGetHgvs (void) const
	Check if it is safe to call GetHgvs method. More...
void	ResetHgvs (void)
	Reset Hgvs data member. More...
const THgvs &	GetHgvs (void) const
	Get the Hgvs member data. More...
THgvs &	SetHgvs (void)
	Assign a value to Hgvs data member. More...
bool	IsSetAlleleOrigin (void) const
	Check if a value has been assigned to AlleleOrigin data member. More...
bool	CanGetAlleleOrigin (void) const
	Check if it is safe to call GetAlleleOrigin method. More...
void	ResetAlleleOrigin (void)
	Reset AlleleOrigin data member. More...
const TAlleleOrigin &	GetAlleleOrigin (void) const
	Get the AlleleOrigin member data. More...
TAlleleOrigin &	SetAlleleOrigin (void)
	Assign a value to AlleleOrigin data member. More...
bool	IsSetPhenotype (void) const
	Check if a value has been assigned to Phenotype data member. More...
bool	CanGetPhenotype (void) const
	Check if it is safe to call GetPhenotype method. More...
void	ResetPhenotype (void)
	Reset Phenotype data member. More...
const TPhenotype &	GetPhenotype (void) const
	Get the Phenotype member data. More...
TPhenotype &	SetPhenotype (void)
	Assign a value to Phenotype data member. More...
bool	IsSetBioSource (void) const
	Check if a value has been assigned to BioSource data member. More...
bool	CanGetBioSource (void) const
	Check if it is safe to call GetBioSource method. More...
void	ResetBioSource (void)
	Reset BioSource data member. More...
const TBioSource &	GetBioSource (void) const
	Get the BioSource member data. More...
TBioSource &	SetBioSource (void)
	Assign a value to BioSource data member. More...
bool	IsSetFrequency (void) const
	Check if a value has been assigned to Frequency data member. More...
bool	CanGetFrequency (void) const
	Check if it is safe to call GetFrequency method. More...
void	ResetFrequency (void)
	Reset Frequency data member. More...
const TFrequency &	GetFrequency (void) const
	Get the Frequency member data. More...
TFrequency &	SetFrequency (void)
	Assign a value to Frequency data member. More...
virtual void	Reset (void)
	Reset the whole object. More...
Public Member Functions inherited from CSerialObject
	CSerialObject (void)
virtual	~CSerialObject (void)
virtual const CTypeInfo *	GetThisTypeInfo (void) const =0
virtual void	Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
	Set object to copy of another one. More...
virtual bool	Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
	Check if both objects contain the same values. More...
virtual void	DebugDump (CDebugDumpContext ddc, unsigned int depth) const
	Define method for dumping debug information. More...
void	ThrowUnassigned (TMemberIndex index) const
void	ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const
bool	HasNamespaceName (void) const
	Check if object data type has namespace name. More...
const string &	GetNamespaceName (void) const
	Get namespace name. More...
bool	HasNamespacePrefix (void) const
	Check if data type has namespace prefix. More...
const string &	GetNamespacePrefix (void) const
	Get namespace prefix. More...
Public Member Functions inherited from CObject
	CObject (void)
	Constructor. More...
	CObject (const CObject &src)
	Copy constructor. More...
virtual	~CObject (void)
	Destructor. More...
CObject &	operator= (const CObject &src) THROWS_NONE
	Assignment operator. More...
bool	CanBeDeleted (void) const THROWS_NONE
	Check if object can be deleted. More...
bool	IsAllocatedInPool (void) const THROWS_NONE
	Check if object is allocated in memory pool (not system heap) More...
bool	Referenced (void) const THROWS_NONE
	Check if object is referenced. More...
bool	ReferencedOnlyOnce (void) const THROWS_NONE
	Check if object is referenced only once. More...
void	AddReference (void) const
	Add reference to object. More...
void	RemoveReference (void) const
	Remove reference to object. More...
void	ReleaseReference (void) const
	Remove reference without deleting object. More...
virtual void	DoNotDeleteThisObject (void)
	Mark this object as not allocated in heap – do not delete this object. More...
virtual void	DoDeleteThisObject (void)
	Mark this object as allocated in heap – object can be deleted. More...
void *	operator new (size_t size)
	Define new operator for memory allocation. More...
void *	operator new[] (size_t size)
	Define new[] operator for 'array' memory allocation. More...
void	operator delete (void *ptr)
	Define delete operator for memory deallocation. More...
void	operator delete[] (void *ptr)
	Define delete[] operator for memory deallocation. More...
void *	operator new (size_t size, void *place)
	Define new operator. More...
void	operator delete (void *ptr, void *place)
	Define delete operator. More...
void *	operator new (size_t size, CObjectMemoryPool *place)
	Define new operator using memory pool. More...
void	operator delete (void *ptr, CObjectMemoryPool *place)
	Define delete operator. More...
Public Member Functions inherited from CDebugDumpable
	CDebugDumpable (void)
virtual	~CDebugDumpable (void)
void	DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
void	DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
void	DumpToConsole (void) const

Private Types
typedef CRs_Base	Tparent

Private Member Functions
	CRs (const CRs &value)
CRs &	operator= (const CRs &value)

Additional Inherited Members
Public Types inherited from CRs_Base
enum class	E_memberIndex {   e__allMandatory = 0 , e_attlist , e_het , e_validation ,   e_create , e_update , e_sequence , e_ss ,   e_assembly , e_primarySequence , e_rsStruct , e_rsLinkout ,   e_mergeHistory , e_hgvs , e_alleleOrigin , e_phenotype ,   e_bioSource , e_frequency }
typedef C_Attlist	TAttlist
typedef C_Het	THet
typedef C_Validation	TValidation
typedef C_Create	TCreate
typedef C_Update	TUpdate
typedef C_Sequence	TSequence
typedef list< CRef< CSs > >	TSs
typedef list< CRef< CAssembly > >	TAssembly
typedef list< CRef< CPrimarySequence > >	TPrimarySequence
typedef list< CRef< CRsStruct > >	TRsStruct
typedef list< CRef< CRsLinkout > >	TRsLinkout
typedef C_E_MergeHistory	C_E
typedef list< CRef< C_E_MergeHistory > >	TMergeHistory
typedef list< string >	THgvs
typedef list< CRef< C_E_AlleleOrigin > >	TAlleleOrigin
typedef list< CRef< C_E_Phenotype > >	TPhenotype
typedef list< CRef< C_E_BioSource > >	TBioSource
typedef list< CRef< C_E_Frequency > >	TFrequency
typedef Tparent::CMemberIndex< E_memberIndex, 18 >	TmemberIndex
Public Types inherited from CObject
enum	EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
	Control filling of newly allocated memory. More...
typedef CObjectCounterLocker	TLockerType
	Default locker type for CRef. More...
typedef atomic< Uint8 >	TCounter
	Counter type is CAtomiCounter. More...
typedef Uint8	TCount
	Alias for value type of counter. More...
Static Public Member Functions inherited from CSerialObject
static void	SetVerifyDataThread (ESerialVerifyData verify)
static void	SetVerifyDataGlobal (ESerialVerifyData verify)
static string	UnassignedString (void)
static CStringUTF8	UnassignedStringUTF8 (void)
static char	UnassignedByte (void)
Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (void)
	Define method to throw null pointer exception. More...
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (const type_info &type)
static EAllocFillMode	GetAllocFillMode (void)
static void	SetAllocFillMode (EAllocFillMode mode)
static void	SetAllocFillMode (const string &value)
	Set mode from configuration parameter value. More...
Static Public Member Functions inherited from CDebugDumpable
static void	EnableDebugDump (bool on)
Static Public Attributes inherited from CSerialObject
static const char *	ms_UnassignedStr = "<*unassigned*>"
static const char	ms_UnassignedByte = char(0xcd)
Static Public Attributes inherited from CObject
static const TCount	eCounterBitsCanBeDeleted = 1 << 0
	Define possible object states. More...
static const TCount	eCounterBitsInPlainHeap = 1 << 1
	Heap signature was found. More...
static const TCount	eCounterBitsPlaceMask
	Mask for 'in heap' state flags. More...
static const int	eCounterStep = 1 << 2
	Skip over the "in heap" bits. More...
static const TCount	eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
	Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
static const TCount	eCounterStateMask
	Valid object, and object in heap. More...
Protected Member Functions inherited from CObject
virtual void	DeleteThis (void)
	Virtual method "deleting" this object. More...

Detailed Description

CRs –.

Definition at line 65 of file Rs.hpp.

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The documentation for this class was generated from the following files:

• include/objects/docsum/Rs.hpp
• src/objects/docsum/Rs.cpp