#include <objmgr/seqdesc_ci.hpp>

Collaboration diagram for CSeqdesc_CI:

Public Types
typedef vector< CSeqdesc::E_Choice >	TDescChoices

Public Member Functions
	CSeqdesc_CI (void)

	CSeqdesc_CI (const CSeq_descr_CI &desc_it, CSeqdesc::E_Choice choice=CSeqdesc::e_not_set)

	CSeqdesc_CI (const CBioseq_Handle &handle, CSeqdesc::E_Choice choice=CSeqdesc::e_not_set, size_t search_depth=0)
	Create an iterator that enumerates CSeqdesc objects from a bioseq with limit number of seq-entries to "search_depth" (0 = unlimited) for specific type. More...

	CSeqdesc_CI (const CSeq_entry_Handle &entry, CSeqdesc::E_Choice choice=CSeqdesc::e_not_set, size_t search_depth=0)
	Create an iterator that enumerates CSeqdesc objects from a seq-entry, limit number of seq-entries to "search_depth" (0 = unlimited) for specific type. More...

	CSeqdesc_CI (const CBioseq_Handle &handle, const TDescChoices &choices, size_t search_depth=0)
	Create an iterator that enumerates CSeqdesc objects from a bioseq with limit number of seq-entries to "search_depth" (0 = unlimited) for set of types. More...

	CSeqdesc_CI (const CSeq_entry_Handle &entry, const TDescChoices &choices, size_t search_depth=0)
	Create an iterator that enumerates CSeqdesc objects from a seq-entry, limit number of seq-entries to "search_depth" (0 = unlimited) for set of types. More...

	CSeqdesc_CI (const CSeqdesc_CI &iter)

	~CSeqdesc_CI (void)

CSeqdesc_CI &	operator= (const CSeqdesc_CI &iter)

CSeqdesc_CI &	operator++ (void)
	Move to the next object in iterated sequence. More...

	DECLARE_OPERATOR_BOOL (m_Entry)
	Check if iterator points to an object. More...

const CSeqdesc &	operator* (void) const

const CSeqdesc *	operator-> (void) const

CSeq_entry_Handle	GetSeq_entry_Handle (void) const

Private Types
typedef unsigned	TDescTypeMask

typedef list< CRef< CSeqdesc > >	TDescList

typedef TDescList::const_iterator	TDescList_CI

Private Member Functions
CSeqdesc_CI	operator++ (int)

void	x_AddChoice (CSeqdesc::E_Choice choice)

void	x_RemoveChoice (CSeqdesc::E_Choice choice)

void	x_SetChoice (CSeqdesc::E_Choice choice)

void	x_SetChoices (const TDescChoices &choices)

bool	x_RequestedType (void) const

bool	x_Valid (void) const

bool	x_ValidDesc (void) const

void	x_FirstDesc (void)

void	x_NextDesc (void)

void	x_SetEntry (const CSeq_descr_CI &entry)

void	x_Next (void)

void	x_Settle (void)

const CBioseq_Base_Info &	x_GetBaseInfo (void) const

void	x_CheckRef (const CBioseq_Handle &handle)

Private Attributes
TDescTypeMask	m_Choice

CSeq_descr_CI	m_Entry

TDescList_CI	m_Desc_CI

CBioseq_Handle	m_Ref

bool	m_HaveTitle

size_t	m_Depth

Detailed Description

CSeqdesc_CI –.

Another type of descriptor Enumerate individual descriptors (CSeqdesc) rather than sets of them

See also: CSeq_descr_CI

Definition at line 64 of file seqdesc_ci.hpp.

The documentation for this class was generated from the following files:

include/objmgr/seqdesc_ci.hpp
src/objmgr/seqdesc_ci.cpp

Public Types

Public Member Functions

Private Types

Private Member Functions

Private Attributes

Detailed Description