NCBI C++ ToolKit
Macros | Functions
fta_xml.h File Reference
#include "ftablock.h"
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Macros

#define INSDSEQ_START   "<INSDSeq>"
 
#define INSDSEQ_END   "</INSDSeq>"
 
#define INSDSEQ_LOCUS   1
 
#define INSDSEQ_LENGTH   2
 
#define INSDSEQ_STRANDEDNESS   3
 
#define INSDSEQ_MOLTYPE   4
 
#define INSDSEQ_TOPOLOGY   5
 
#define INSDSEQ_DIVISION   6
 
#define INSDSEQ_UPDATE_DATE   7
 
#define INSDSEQ_CREATE_DATE   8
 
#define INSDSEQ_UPDATE_RELEASE   9
 
#define INSDSEQ_CREATE_RELEASE   10
 
#define INSDSEQ_DEFINITION   11
 
#define INSDSEQ_PRIMARY_ACCESSION   12
 
#define INSDSEQ_ENTRY_VERSION   13
 
#define INSDSEQ_ACCESSION_VERSION   14
 
#define INSDSEQ_OTHER_SEQIDS   15
 
#define INSDSEQ_SECONDARY_ACCESSIONS   16
 
#define INSDSEQ_KEYWORDS   17
 
#define INSDSEQ_SEGMENT   18
 
#define INSDSEQ_SOURCE   19
 
#define INSDSEQ_ORGANISM   20
 
#define INSDSEQ_TAXONOMY   21
 
#define INSDSEQ_REFERENCES   22
 
#define INSDSEQ_COMMENT   23
 
#define INSDSEQ_PRIMARY   24
 
#define INSDSEQ_SOURCE_DB   25
 
#define INSDSEQ_DATABASE_REFERENCE   26
 
#define INSDSEQ_FEATURE_TABLE   27
 
#define INSDSEQ_SEQUENCE   28
 
#define INSDSEQ_CONTIG   29
 
#define INSDSECONDARY_ACCN   30
 
#define INSDKEYWORD   31
 
#define INSDFEATURE   32
 
#define INSDFEATURE_KEY   33
 
#define INSDFEATURE_LOCATION   34
 
#define INSDFEATURE_INTERVALS   35
 
#define INSDFEATURE_QUALS   36
 
#define INSDINTERVAL   37
 
#define INSDINTERVAL_FROM   38
 
#define INSDINTERVAL_TO   39
 
#define INSDINTERVAL_POINT   40
 
#define INSDINTERVAL_ACCESSION   41
 
#define INSDQUALIFIER   42
 
#define INSDQUALIFIER_NAME   43
 
#define INSDQUALIFIER_VALUE   44
 
#define INSDREFERENCE   45
 
#define INSDREFERENCE_REFERENCE   46
 
#define INSDREFERENCE_POSITION   47
 
#define INSDREFERENCE_AUTHORS   48
 
#define INSDREFERENCE_CONSORTIUM   49
 
#define INSDREFERENCE_TITLE   50
 
#define INSDREFERENCE_JOURNAL   51
 
#define INSDREFERENCE_MEDLINE   52
 
#define INSDREFERENCE_PUBMED   53
 
#define INSDREFERENCE_REMARK   54
 
#define INSDREFERENCE_XREF   55
 
#define INSDXREF   56
 
#define INSDXREF_DBNAME   57
 
#define INSDXREF_ID   58
 
#define INSDAUTHOR   59
 
#define XML_FEATURES   1
 

Functions

char * XMLLoadEntry (ParserPtr pp, bool err)
 
char * XMLGetTagValue (const char *entry, const XmlIndex *xip)
 
char * XMLFindTagValue (const char *entry, const XmlIndex *xip, Int4 tag)
 
DataBlkPtr XMLBuildRefDataBlk (char *entry, const XmlIndex *xip, int type)
 
char * XMLConcatSubTags (const char *entry, const XmlIndex *xip, Int4 tag, Char sep)
 
void XMLGetKeywords (const char *entry, const XmlIndex *xip, TKeywordList &keywords)
 

Macro Definition Documentation

◆ INSDAUTHOR

#define INSDAUTHOR   59

Definition at line 103 of file fta_xml.h.

◆ INSDFEATURE

#define INSDFEATURE   32

Definition at line 76 of file fta_xml.h.

◆ INSDFEATURE_INTERVALS

#define INSDFEATURE_INTERVALS   35

Definition at line 79 of file fta_xml.h.

◆ INSDFEATURE_KEY

#define INSDFEATURE_KEY   33

Definition at line 77 of file fta_xml.h.

◆ INSDFEATURE_LOCATION

#define INSDFEATURE_LOCATION   34

Definition at line 78 of file fta_xml.h.

◆ INSDFEATURE_QUALS

#define INSDFEATURE_QUALS   36

Definition at line 80 of file fta_xml.h.

◆ INSDINTERVAL

#define INSDINTERVAL   37

Definition at line 81 of file fta_xml.h.

◆ INSDINTERVAL_ACCESSION

#define INSDINTERVAL_ACCESSION   41

Definition at line 85 of file fta_xml.h.

◆ INSDINTERVAL_FROM

#define INSDINTERVAL_FROM   38

Definition at line 82 of file fta_xml.h.

◆ INSDINTERVAL_POINT

#define INSDINTERVAL_POINT   40

Definition at line 84 of file fta_xml.h.

◆ INSDINTERVAL_TO

#define INSDINTERVAL_TO   39

Definition at line 83 of file fta_xml.h.

◆ INSDKEYWORD

#define INSDKEYWORD   31

Definition at line 75 of file fta_xml.h.

◆ INSDQUALIFIER

#define INSDQUALIFIER   42

Definition at line 86 of file fta_xml.h.

◆ INSDQUALIFIER_NAME

#define INSDQUALIFIER_NAME   43

Definition at line 87 of file fta_xml.h.

◆ INSDQUALIFIER_VALUE

#define INSDQUALIFIER_VALUE   44

Definition at line 88 of file fta_xml.h.

◆ INSDREFERENCE

#define INSDREFERENCE   45

Definition at line 89 of file fta_xml.h.

◆ INSDREFERENCE_AUTHORS

#define INSDREFERENCE_AUTHORS   48

Definition at line 92 of file fta_xml.h.

◆ INSDREFERENCE_CONSORTIUM

#define INSDREFERENCE_CONSORTIUM   49

Definition at line 93 of file fta_xml.h.

◆ INSDREFERENCE_JOURNAL

#define INSDREFERENCE_JOURNAL   51

Definition at line 95 of file fta_xml.h.

◆ INSDREFERENCE_MEDLINE

#define INSDREFERENCE_MEDLINE   52

Definition at line 96 of file fta_xml.h.

◆ INSDREFERENCE_POSITION

#define INSDREFERENCE_POSITION   47

Definition at line 91 of file fta_xml.h.

◆ INSDREFERENCE_PUBMED

#define INSDREFERENCE_PUBMED   53

Definition at line 97 of file fta_xml.h.

◆ INSDREFERENCE_REFERENCE

#define INSDREFERENCE_REFERENCE   46

Definition at line 90 of file fta_xml.h.

◆ INSDREFERENCE_REMARK

#define INSDREFERENCE_REMARK   54

Definition at line 98 of file fta_xml.h.

◆ INSDREFERENCE_TITLE

#define INSDREFERENCE_TITLE   50

Definition at line 94 of file fta_xml.h.

◆ INSDREFERENCE_XREF

#define INSDREFERENCE_XREF   55

Definition at line 99 of file fta_xml.h.

◆ INSDSECONDARY_ACCN

#define INSDSECONDARY_ACCN   30

Definition at line 74 of file fta_xml.h.

◆ INSDSEQ_ACCESSION_VERSION

#define INSDSEQ_ACCESSION_VERSION   14

Definition at line 55 of file fta_xml.h.

◆ INSDSEQ_COMMENT

#define INSDSEQ_COMMENT   23

Definition at line 64 of file fta_xml.h.

◆ INSDSEQ_CONTIG

#define INSDSEQ_CONTIG   29

Definition at line 70 of file fta_xml.h.

◆ INSDSEQ_CREATE_DATE

#define INSDSEQ_CREATE_DATE   8

Definition at line 49 of file fta_xml.h.

◆ INSDSEQ_CREATE_RELEASE

#define INSDSEQ_CREATE_RELEASE   10

Definition at line 51 of file fta_xml.h.

◆ INSDSEQ_DATABASE_REFERENCE

#define INSDSEQ_DATABASE_REFERENCE   26

Definition at line 67 of file fta_xml.h.

◆ INSDSEQ_DEFINITION

#define INSDSEQ_DEFINITION   11

Definition at line 52 of file fta_xml.h.

◆ INSDSEQ_DIVISION

#define INSDSEQ_DIVISION   6

Definition at line 47 of file fta_xml.h.

◆ INSDSEQ_END

#define INSDSEQ_END   "</INSDSeq>"

Definition at line 40 of file fta_xml.h.

◆ INSDSEQ_ENTRY_VERSION

#define INSDSEQ_ENTRY_VERSION   13

Definition at line 54 of file fta_xml.h.

◆ INSDSEQ_FEATURE_TABLE

#define INSDSEQ_FEATURE_TABLE   27

Definition at line 68 of file fta_xml.h.

◆ INSDSEQ_KEYWORDS

#define INSDSEQ_KEYWORDS   17

Definition at line 58 of file fta_xml.h.

◆ INSDSEQ_LENGTH

#define INSDSEQ_LENGTH   2

Definition at line 43 of file fta_xml.h.

◆ INSDSEQ_LOCUS

#define INSDSEQ_LOCUS   1

Definition at line 42 of file fta_xml.h.

◆ INSDSEQ_MOLTYPE

#define INSDSEQ_MOLTYPE   4

Definition at line 45 of file fta_xml.h.

◆ INSDSEQ_ORGANISM

#define INSDSEQ_ORGANISM   20

Definition at line 61 of file fta_xml.h.

◆ INSDSEQ_OTHER_SEQIDS

#define INSDSEQ_OTHER_SEQIDS   15

Definition at line 56 of file fta_xml.h.

◆ INSDSEQ_PRIMARY

#define INSDSEQ_PRIMARY   24

Definition at line 65 of file fta_xml.h.

◆ INSDSEQ_PRIMARY_ACCESSION

#define INSDSEQ_PRIMARY_ACCESSION   12

Definition at line 53 of file fta_xml.h.

◆ INSDSEQ_REFERENCES

#define INSDSEQ_REFERENCES   22

Definition at line 63 of file fta_xml.h.

◆ INSDSEQ_SECONDARY_ACCESSIONS

#define INSDSEQ_SECONDARY_ACCESSIONS   16

Definition at line 57 of file fta_xml.h.

◆ INSDSEQ_SEGMENT

#define INSDSEQ_SEGMENT   18

Definition at line 59 of file fta_xml.h.

◆ INSDSEQ_SEQUENCE

#define INSDSEQ_SEQUENCE   28

Definition at line 69 of file fta_xml.h.

◆ INSDSEQ_SOURCE

#define INSDSEQ_SOURCE   19

Definition at line 60 of file fta_xml.h.

◆ INSDSEQ_SOURCE_DB

#define INSDSEQ_SOURCE_DB   25

Definition at line 66 of file fta_xml.h.

◆ INSDSEQ_START

#define INSDSEQ_START   "<INSDSeq>"

Definition at line 39 of file fta_xml.h.

◆ INSDSEQ_STRANDEDNESS

#define INSDSEQ_STRANDEDNESS   3

Definition at line 44 of file fta_xml.h.

◆ INSDSEQ_TAXONOMY

#define INSDSEQ_TAXONOMY   21

Definition at line 62 of file fta_xml.h.

◆ INSDSEQ_TOPOLOGY

#define INSDSEQ_TOPOLOGY   5

Definition at line 46 of file fta_xml.h.

◆ INSDSEQ_UPDATE_DATE

#define INSDSEQ_UPDATE_DATE   7

Definition at line 48 of file fta_xml.h.

◆ INSDSEQ_UPDATE_RELEASE

#define INSDSEQ_UPDATE_RELEASE   9

Definition at line 50 of file fta_xml.h.

◆ INSDXREF

#define INSDXREF   56

Definition at line 100 of file fta_xml.h.

◆ INSDXREF_DBNAME

#define INSDXREF_DBNAME   57

Definition at line 101 of file fta_xml.h.

◆ INSDXREF_ID

#define INSDXREF_ID   58

Definition at line 102 of file fta_xml.h.

◆ XML_FEATURES

#define XML_FEATURES   1

Definition at line 105 of file fta_xml.h.

Function Documentation

◆ XMLBuildRefDataBlk()

DataBlkPtr XMLBuildRefDataBlk ( char *  entry,
const XmlIndex xip,
int  type 
)

◆ XMLConcatSubTags()

char* XMLConcatSubTags ( const char *  entry,
const XmlIndex xip,
Int4  tag,
Char  sep 
)

◆ XMLFindTagValue()

char* XMLFindTagValue ( const char *  entry,
const XmlIndex xip,
Int4  tag 
)

◆ XMLGetKeywords()

void XMLGetKeywords ( const char *  entry,
const XmlIndex xip,
TKeywordList keywords 
)

◆ XMLGetTagValue()

char* XMLGetTagValue ( const char *  entry,
const XmlIndex xip 
)

◆ XMLLoadEntry()

char* XMLLoadEntry ( ParserPtr  pp,
bool  err 
)
Modified on Mon Mar 04 05:09:53 2024 by modify_doxy.py rev. 669887