NCBI C++ ToolKit
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BlastRPSInfo Struct Reference

Search Toolkit Book for BlastRPSInfo

The RPS engine uses this structure to access all of the RPS blast related data (assumed to be collected in an implementation-specific manner). More...

#include <algo/blast/core/blast_rps.h>

+ Collaboration diagram for BlastRPSInfo:

Public Attributes

BlastRPSLookupFileHeaderlookup_header
 for '.loo' file More...
 
BlastRPSProfileHeaderprofile_header
 for '.rps' file More...
 
BlastRPSAuxInfo aux_info
 for '.aux' file More...
 
BlastRPSProfileHeaderfreq_header
 for '.wcounts' file More...
 
BlastRPSProfileHeaderobsr_header
 for '.obsr' file More...
 
BlastRPSFreqRatiosHeaderfreq_ratios_header
 for '.freq' file More...
 

Detailed Description

The RPS engine uses this structure to access all of the RPS blast related data (assumed to be collected in an implementation-specific manner).

Definition at line 120 of file blast_rps.h.

Member Data Documentation

◆ aux_info

BlastRPSAuxInfo BlastRPSInfo::aux_info

for '.aux' file

Definition at line 123 of file blast_rps.h.

Referenced by s_RPSComputeTraceback().

◆ freq_header

BlastRPSProfileHeader* BlastRPSInfo::freq_header

for '.wcounts' file

Definition at line 125 of file blast_rps.h.

◆ freq_ratios_header

BlastRPSFreqRatiosHeader* BlastRPSInfo::freq_ratios_header

for '.freq' file

Definition at line 127 of file blast_rps.h.

Referenced by s_RPSGapAlignDataPrepare().

◆ lookup_header

BlastRPSLookupFileHeader* BlastRPSInfo::lookup_header

for '.loo' file

Definition at line 121 of file blast_rps.h.

◆ obsr_header

BlastRPSProfileHeader* BlastRPSInfo::obsr_header

for '.obsr' file

Definition at line 126 of file blast_rps.h.

◆ profile_header

BlastRPSProfileHeader* BlastRPSInfo::profile_header

for '.rps' file

Definition at line 122 of file blast_rps.h.

Referenced by s_RPSComputeTraceback(), and s_RPSGapAlignDataPrepare().


The documentation for this struct was generated from the following file:
Modified on Sun Apr 14 05:28:13 2024 by modify_doxy.py rev. 669887