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Accession: PRJEB62692 ID: 979719

EMG produced TPA metagenomics assembly of PRJEB41539 data set (Alterations of gut microbiome, metabolome and lipidome in Takayasu arteritis).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB41539, and was assembled with metaspades v3. More...
AccessionPRJEB62692
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "MGnify: the microbiome analysis resource in 2020.", Nucleic Acids Res, 2020 Jan 8;48(D1):D570-D578
SubmissionRegistration date: 3-Jun-2023
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)18781
WGS master255
Publications
PubMed1
PMC1
Other datasets
BioSample255
Assembly255
Assembly details:
Assembly levelNumber of Assemblies
255
255
AssemblyLevelWGSBioSampleTaxonomy
GCA_958353645.1ContigCATWTF000000000SAMEA114062476
GCA_958353615.1ContigCATWTJ000000000SAMEA114062592
GCA_958442745.1ContigCAUCIB000000000SAMEA114062561
GCA_958440605.1ContigCAUBZV000000000SAMEA114062564
GCA_958352335.1ContigCATWOF000000000SAMEA114062620
GCA_958353505.1ContigCATWSR000000000SAMEA114062579
GCA_958442785.1ContigCAUCIH000000000SAMEA114062621
GCA_958351525.1ContigCATWLB000000000SAMEA114062693
GCA_958448025.1ContigCAUDCG000000000SAMEA114062664
GCA_958447625.1ContigCAUDAW000000000SAMEA114062503
GCA_958440805.1ContigCAUCAR000000000SAMEA114062697
GCA_958444275.1ContigCAUCNY000000000SAMEA114062706
GCA_958440535.1ContigCAUBZM000000000SAMEA114062595
GCA_958447515.1ContigCAUDAM000000000SAMEA114062473
GCA_958444205.1ContigCAUCNR000000000SAMEA114062671
GCA_958440645.1ContigCAUBZZ000000000SAMEA114062598
GCA_958351675.1ContigCATWLS000000000SAMEA114062673
GCA_958353555.1ContigCATWSY000000000SAMEA114062565
GCA_958443035.1ContigCAUCJE000000000SAMEA114062614
GCA_958351825.1ContigCATWMG000000000SAMEA114062570
GCA_958442795.1ContigCAUCIG000000000SAMEA114062640
GCA_958444195.1ContigCAUCNS000000000SAMEA114062674
GCA_958351655.1ContigCATWLO000000000SAMEA114062711
GCA_958440695.1ContigCAUCAG000000000SAMEA114062681
GCA_958448005.1ContigCAUDCK000000000SAMEA114062670
GCA_958352185.1ContigCATWNR000000000SAMEA114062668
GCA_958447545.1ContigCAUDAT000000000SAMEA114062489
GCA_958447645.1ContigCAUDAY000000000SAMEA114062529
GCA_958442715.1ContigCAUCHY000000000SAMEA114062488
GCA_958351755.1ContigCATWLY000000000SAMEA114062633
GCA_958444175.1ContigCAUCNN000000000SAMEA114062680
GCA_958442985.1ContigCAUCIY000000000SAMEA114062602
GCA_958442815.1ContigCAUCIJ000000000SAMEA114062650
GCA_958447655.1ContigCAUDAU000000000SAMEA114062537
GCA_958443935.1ContigCAUCMX000000000SAMEA114062539
GCA_958353545.1ContigCATWSV000000000SAMEA114062699
GCA_958352235.1ContigCATWNZ000000000SAMEA114062685
GCA_958443915.1ContigCAUCMP000000000SAMEA114062526
GCA_958447885.1ContigCAUDBV000000000SAMEA114062600
GCA_958447865.1ContigCAUDBT000000000SAMEA114062627
GCA_958443745.1ContigCAUCLY000000000SAMEA114062482
GCA_958440765.1ContigCAUCAM000000000SAMEA114062605
GCA_958442805.1ContigCAUCIF000000000SAMEA114062682
GCA_958443985.1ContigCAUCMS000000000SAMEA114062566
GCA_958353485.1ContigCATWST000000000SAMEA114062696
GCA_958442915.1ContigCAUCIW000000000SAMEA114062625
GCA_958443835.1ContigCAUCMF000000000SAMEA114062490
GCA_958447695.1ContigCAUDBH000000000SAMEA114062531
GCA_958443955.1ContigCAUCMW000000000SAMEA114062533
GCA_958353565.1ContigCATWSX000000000SAMEA114062555
GCA_958352365.1ContigCATWOH000000000SAMEA114062569
GCA_958443025.1ContigCAUCJD000000000SAMEA114062701
GCA_958440425.1ContigCAUBZC000000000SAMEA114062491
GCA_958448145.1ContigCAUDCU000000000SAMEA114062676
GCA_958353585.1ContigCATWSZ000000000SAMEA114062553
GCA_958353575.1ContigCATWTB000000000SAMEA114062667
GCA_958352925.1ContigCATWQM000000000SAMEA114062631
GCA_958442725.1ContigCAUCIA000000000SAMEA114062530
GCA_958443015.1ContigCAUCJB000000000SAMEA114062691
GCA_958444155.1ContigCAUCNM000000000SAMEA114062629
GCA_958351775.1ContigCATWMD000000000SAMEA114062638
GCA_958353625.1ContigCATWTD000000000SAMEA114062606
GCA_958447725.1ContigCAUDBF000000000SAMEA114062538
GCA_958440735.1ContigCAUCAH000000000SAMEA114062662
GCA_958351595.1ContigCATWLG000000000SAMEA114062541
GCA_958440665.1ContigCAUBZY000000000SAMEA114062608
GCA_958351865.1ContigCATWMI000000000SAMEA114062661
GCA_958440595.1ContigCAUBZT000000000SAMEA114062545
GCA_958444245.1ContigCAUCOD000000000SAMEA114062626
GCA_958440555.1ContigCAUBZQ000000000SAMEA114062469
GCA_958440675.1ContigCAUCAC000000000SAMEA114062618
GCA_958440685.1ContigCAUCAE000000000SAMEA114062652
GCA_958351535.1ContigCATWLE000000000SAMEA114062695
GCA_958440625.1ContigCAUBZX000000000SAMEA114062623
GCA_958447845.1ContigCAUDBR000000000SAMEA114062615
GCA_958448135.1ContigCAUDCT000000000SAMEA114062705
GCA_958447615.1ContigCAUDAV000000000SAMEA114062509
GCA_958444115.1ContigCAUCNJ000000000SAMEA114062604
GCA_958444015.1ContigCAUCMY000000000SAMEA114062624
GCA_958448415.1ContigCAUDDX000000000SAMEA114062714
GCA_958444125.1ContigCAUCNI000000000SAMEA114062616
GCA_958443825.1ContigCAUCME000000000SAMEA114062470
GCA_958447975.1ContigCAUDCD000000000SAMEA114062690
GCA_958444145.1ContigCAUCNL000000000SAMEA114062612
GCA_958352895.1ContigCATWQJ000000000SAMEA114062669
GCA_958444045.1ContigCAUCNH000000000SAMEA114062523
GCA_958353725.1ContigCATWTP000000000SAMEA114062551
GCA_958442705.1ContigCAUCHX000000000SAMEA114062510
GCA_958351715.1ContigCATWLU000000000SAMEA114062547
GCA_958352975.1ContigCATWQP000000000SAMEA114062580
GCA_958447815.1ContigCAUDBO000000000SAMEA114062588
GCA_958353475.1ContigCATWSO000000000SAMEA114062702
GCA_958447535.1ContigCAUDAL000000000SAMEA114062486
GCA_958353065.1ContigCATWQY000000000SAMEA114062709
GCA_958442875.1ContigCAUCIV000000000SAMEA114062707
GCA_958350455.1ContigCATWGY000000000SAMEA114062493
GCA_958442625.1ContigCAUCHN000000000SAMEA114062480
GCA_958447505.1ContigCAUDAJ000000000SAMEA114062487
GCA_958442575.1ContigCAUCHK000000000SAMEA114062475
GCA_958351665.1ContigCATWLR000000000SAMEA114062479
GCA_958443905.1ContigCAUCMM000000000SAMEA114062528
GCA_958447735.1ContigCAUDBC000000000SAMEA114062535
GCA_958444085.1ContigCAUCNF000000000SAMEA114062660
GCA_958353155.1ContigCATWRL000000000SAMEA114062544
GCA_958440405.1ContigCAUBYY000000000SAMEA114062464
GCA_958353705.1ContigCATWTL000000000SAMEA114062502
GCA_958351565.1ContigCATYEK000000000SAMEA114062679
GCA_958444005.1ContigCAUCMV000000000SAMEA114062549
GCA_958444215.1ContigCAUCNQ000000000SAMEA114062698
GCA_958440455.1ContigCAUBZE000000000SAMEA114062483
GCA_958444235.1ContigCAUCNV000000000SAMEA114062675
GCA_958447685.1ContigCAUDAZ000000000SAMEA114062518
GCA_958353535.1ContigCATWSU000000000SAMEA114062520
GCA_958447785.1ContigCAUDBL000000000SAMEA114062578
GCA_958440815.1ContigCAUCAQ000000000SAMEA114062694
GCA_958447745.1ContigCAUDBG000000000SAMEA114062546
GCA_958443815.1ContigCAUCMG000000000SAMEA114062495
GCA_958447585.1ContigCAUDAP000000000SAMEA114062477
GCA_958447905.1ContigCAUDBZ000000000SAMEA114062644
GCA_958443805.1ContigCAUCMC000000000SAMEA114062501
GCA_958447755.1ContigCAUDBI000000000SAMEA114062559
GCA_958447665.1ContigCAUDBB000000000SAMEA114062543
GCA_958353135.1ContigCATWRF000000000SAMEA114062552
GCA_958351555.1ContigCATWLF000000000SAMEA114062599
GCA_958351785.1ContigCATWMA000000000SAMEA114062500
GCA_958351815.1ContigCATWMF000000000SAMEA114062472
GCA_958351885.1ContigCATWMK000000000SAMEA114062617
GCA_958351605.1ContigCATWLH000000000SAMEA114062540
GCA_958352285.1ContigCATWNY000000000SAMEA114062466
GCA_958352325.1ContigCATWOE000000000SAMEA114062596
GCA_958353715.1ContigCATWTM000000000SAMEA114062474
GCA_958353685.1ContigCATWTK000000000SAMEA114062499
GCA_958443995.1ContigCAUCMT000000000SAMEA114062591
GCA_958443925.1ContigCAUCMN000000000SAMEA114062563
GCA_958443865.1ContigCAUCMI000000000SAMEA114062550
GCA_958440745.1ContigCAUCAK000000000SAMEA114062655
GCA_958442775.1ContigCAUCIE000000000SAMEA114062572
GCA_958447875.1ContigCAUDBU000000000SAMEA114062611
GCA_958440505.1ContigCAUBZO000000000SAMEA114062506
GCA_958447895.1ContigCAUDBY000000000SAMEA114062628
GCA_958447915.1ContigCAUDCB000000000SAMEA114062622
GCA_958444165.1ContigCAUCNP000000000SAMEA114062689
GCA_958444075.1ContigCAUCNB000000000SAMEA114062590
GCA_958442965.1ContigCAUCJA000000000SAMEA114062587
GCA_958440835.1ContigCAUCAU000000000SAMEA114062692
GCA_958447775.1ContigCAUDBK000000000SAMEA114062584
GCA_958442615.1ContigCAUCHO000000000SAMEA114062471
GCA_958443855.1ContigCAUCMK000000000SAMEA114062511
GCA_958448155.1ContigCAUDCV000000000SAMEA114062708
GCA_958442765.1ContigCAUCID000000000SAMEA114062577
GCA_958447605.1ContigCAUDAS000000000SAMEA114062517
GCA_958440575.1ContigCAUBZR000000000SAMEA114062557
GCA_958443845.1ContigCAUCMH000000000SAMEA114062498
GCA_958352935.1ContigCATWQN000000000SAMEA114062542
GCA_958352195.1ContigCATWNQ000000000SAMEA114062641
GCA_958443725.1ContigCAUCLT000000000SAMEA114062465
GCA_958443715.1ContigCAUCLS000000000SAMEA114062460
GCA_958353415.1ContigCATWSJ000000000SAMEA114062687
GCA_958353635.1ContigCATWTE000000000SAMEA114062683
GCA_958352905.1ContigCATWQK000000000SAMEA114062678
GCA_958351545.1ContigCATWLL000000000SAMEA114062619
GCA_958442635.1ContigCAUCHP000000000SAMEA114062521
GCA_958442905.1ContigCAUCIR000000000SAMEA114062630
GCA_958442735.1ContigCAUCHZ000000000SAMEA114062536
GCA_958444035.1ContigCAUCND000000000SAMEA114062507
GCA_958447835.1ContigCAUDBQ000000000SAMEA114062568
GCA_958447925.1ContigCAUDBW000000000SAMEA114062677
GCA_958447965.1ContigCAUDCE000000000SAMEA114062646
GCA_958440475.1ContigCAUBZJ000000000SAMEA114062512
GCA_958440495.1ContigCAUBZK000000000SAMEA114062525
GCA_958443885.1ContigCAUCMJ000000000SAMEA114062558
GCA_958447995.1ContigCAUDCI000000000SAMEA114062656
GCA_958444095.1ContigCAUCNC000000000SAMEA114062649
GCA_958442955.1ContigCAUCIX000000000SAMEA114062700
GCA_958440825.1ContigCAUCAS000000000SAMEA114062710
GCA_958440775.1ContigCAUCAJ000000000SAMEA114062632
GCA_958352375.1ContigCATWOI000000000SAMEA114062534
GCA_958352095.1ContigCATWNG000000000SAMEA114062666
GCA_958447985.1ContigCAUDCH000000000SAMEA114062654
GCA_958442605.1ContigCAUCHR000000000SAMEA114062462
GCA_958448015.1ContigCAUDCM000000000SAMEA114062651
GCA_958447945.1ContigCAUDCA000000000SAMEA114062647
GCA_958352995.1ContigCATWQS000000000SAMEA114062571
GCA_958352305.1ContigCATWOC000000000SAMEA114062642
GCA_958353525.1ContigCATWSW000000000SAMEA114062643
GCA_958351805.1ContigCATWME000000000SAMEA114062492
GCA_958353595.1ContigCATWTC000000000SAMEA114062659
GCA_958440545.1ContigCAUBZP000000000SAMEA114062567
GCA_958447675.1ContigCAUDBA000000000SAMEA114062527
GCA_958447855.1ContigCAUDBS000000000SAMEA114062636
GCA_958440725.1ContigCAUCAI000000000SAMEA114062613
GCA_958440585.1ContigCAUBZS000000000SAMEA114062597
GCA_958443895.1ContigCAUCMO000000000SAMEA114062532
GCA_958442645.1ContigCAUCHT000000000SAMEA114062560
GCA_958442565.1ContigCAUCHJ000000000SAMEA114062522
GCA_958351495.1ContigCATWLA000000000SAMEA114062648
GCA_958442755.1ContigCAUCIC000000000SAMEA114062586
GCA_958352165.1ContigCATWNO000000000SAMEA114062513
GCA_958442675.1ContigCAUCHS000000000SAMEA114062504
GCA_958442655.1ContigCAUCHQ000000000SAMEA114062505
GCA_958440715.1ContigCAUCAF000000000SAMEA114062686
GCA_958440615.1ContigCAUBZW000000000SAMEA114062515
GCA_958440705.1ContigCAUCAD000000000SAMEA114062665
GCA_958440565.1ContigCAUBZU000000000SAMEA114062524
GCA_958440485.1ContigCAUBZH000000000SAMEA114062463
GCA_958440465.1ContigCAUBZI000000000SAMEA114062484
GCA_958444185.1ContigCAUCNO000000000SAMEA114062672
GCA_958447495.1ContigCAUDAG000000000SAMEA114062467
GCA_958447765.1ContigCAUDBJ000000000SAMEA114062583
GCA_958447705.1ContigCAUDBD000000000SAMEA114062562
GCA_958447595.1ContigCAUDAQ000000000SAMEA114062508
GCA_958351705.1ContigCATWLT000000000SAMEA114062663
GCA_958443755.1ContigCAUCLX000000000SAMEA114062461
GCA_958443975.1ContigCAUCMR000000000SAMEA114062581
GCA_958353695.1ContigCATWTO000000000SAMEA114062609
GCA_958353665.1ContigCATWTH000000000SAMEA114062468
GCA_958352275.1ContigCATWOA000000000SAMEA114062485
GCA_958352955.1ContigCATWQQ000000000SAMEA114062585
GCA_958447935.1ContigCAUDBX000000000SAMEA114062684
GCA_958444065.1ContigCAUCNG000000000SAMEA114062519
GCA_958444025.1ContigCAUCNA000000000SAMEA114062603
GCA_958444295.1ContigCAUCOB000000000SAMEA114062704
GCA_958447795.1ContigCAUDBM000000000SAMEA114062573
GCA_958352135.1ContigCATWNK000000000SAMEA114062610
GCA_958447635.1ContigCAUDAX000000000SAMEA114062514
GCA_958440655.1ContigCAUCAB000000000SAMEA114062574
GCA_958440985.1ContigCAUCBK000000000SAMEA114062703
GCA_958447955.1ContigCAUDCC000000000SAMEA114062635
GCA_958447525.1ContigCAUDAK000000000SAMEA114062478
GCA_958352205.1ContigCATWNS000000000SAMEA114062713
GCA_958443875.1ContigCAUCML000000000SAMEA114062556
GCA_958351615.1ContigCATWLJ000000000SAMEA114062653
GCA_958350265.1ContigCATWGE000000000SAMEA114062494
GCA_958352265.1ContigCATWNX000000000SAMEA114062496
GCA_958353115.1ContigCATWRG000000000SAMEA114062576
GCA_958353075.1ContigCATWRB000000000SAMEA114062554
GCA_958447565.1ContigCAUDAN000000000SAMEA114062497
GCA_958442975.1ContigCAUCIZ000000000SAMEA114062589
GCA_958440905.1ContigCAUCBA000000000SAMEA114062712
GCA_958444105.1ContigCAUCNE000000000SAMEA114062645
GCA_958440525.1ContigCAUBZN000000000SAMEA114062593
GCA_958440785.1ContigCAUCAN000000000SAMEA114062657
GCA_958442825.1ContigCAUCIK000000000SAMEA114062688
GCA_958447805.1ContigCAUDBN000000000SAMEA114062594
GCA_958352245.1ContigCATWNW000000000SAMEA114062516
GCA_958447825.1ContigCAUDBP000000000SAMEA114062582
GCA_958444055.1ContigCAUCMZ000000000SAMEA114062634
GCA_958442995.1ContigCAUCJC000000000SAMEA114062607
GCA_958444135.1ContigCAUCNK000000000SAMEA114062658
GCA_958447715.1ContigCAUDBE000000000SAMEA114062548
GCA_958443965.1ContigCAUCMQ000000000SAMEA114062575
GCA_958444255.1ContigCAUCNU000000000SAMEA114062637
GCA_958440755.1ContigCAUCAL000000000SAMEA114062639
GCA_958351695.1ContigCATWLV000000000SAMEA114062481
GCA_958440635.1ContigCAUCAA000000000SAMEA114062601

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