GEO DataSets

(Submitter supplied) Traditional differentiation of myoblasts is usually induced by serum starvation method, in which 2%HS is used to induce myoblasts to differentiate into myotubes. But, traditional serum starvation method is difficult to differentiate large yellow croaker muscle satellite cells efficiently. Although myotubes were induced within 2-3 days with medium containing 2% horse serum (HS), they detached shortly and died soon after. more...

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing

Platform:

GPL30112

9 Samples

Download data: CSV

(Submitter supplied) To investigate the role of lncRNAs on lipid metabolism, we did RNAseq to find the difference among large yellow croaker fed with fish oil (FO), soybean oil (SO), olive oil (OO), and palm oil (PO) diets

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platform:

GPL30869

12 Samples

Download data: TXT

(Submitter supplied) Cryptocaryonosis caused by Cryptocaryon irritans is one of the major diseases of large yellow croaker (Larimichthys crocea), which lead to massive economic losses annually. The pathogenesis for cryptocaryonosis has been researched by a series of transcriptome studies under different infection conditions. However, little is known about the roles of tissue-specifically expressed genes during the infection of C. more...

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing

Platform:

GPL30112

15 Samples

Download data: TXT

(Submitter supplied) We obtained the credible target sequences by filtrating high-throughput profiling of muscle tissue in large yellow croaker.The goal of this study is to measured almost all small RNA in muscle not only at the common feeding but also during the fasting period. We set the data of microRNA as a mainspring of study. By bioinformatics analysis, all possible target binding site were compared and predicted in both known and unknown.

Organism:

Larimichthys crocea

Type:

Non-coding RNA profiling by high throughput sequencing; Other

Platform:

GPL24934

2 Samples

Download data: TXT

(Submitter supplied) We sequenced mRNA from 2 muscle samples of the large yellow croaker (Larimichthys crocea) taken from normal feeding fish and fasting stress treatment fish, respectively, to investigate the transcriptome and comparative expression profiles of the large yellow croaker muscle undergoing fasting.

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing; Other

Platform:

GPL20937

2 Samples

Download data: TXT, VCF

(Submitter supplied) We sequenced mRNA from 4 liver samples of the large yellow croaker (Larimichthys crocea) taken from thermal stress treatment fish, normal temperature treatment fish, cold stress treatment fish and fasting stress treatment fish, respectively, to investigate the transcriptome and comparative expression profiles of the large yellow croaker liver undergoing thermal stress, cold stress and fasting.

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing

Platform:

GPL18685

4 Samples

Download data: FA, TXT

(Submitter supplied) Brain transcriptome at 0h, 1h, 3h, 6h, 12h, 24h, 48h after hypoxia stress

Organism:

Larimichthys crocea

Type:

Expression profiling by high throughput sequencing

Platform:

GPL18685

7 Samples

Download data: BEDGRAPH, TXT