GPL11307[Accession] - GEO DataSets - NCBI

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Select item 2000551281.

Exploring the response of Kluyveromyces lactis to arsenite and peroxide stress and the role of the transcription factor KlYap8 and KlYap1

(Submitter supplied) The transcriptional response of K. lactis yeast was investigated following exposure to sodium arsenite (As(III)) and tert-butyl hydroperoxide (t-BOOH). We compared the genome-wide expression profile of Klyap8∆ mutant cells to that of the wild type.

Organism:: Kluyveromyces lactis

Type:: Expression profiling by array

Platform:: GPL11307
12 Samples

Download data: TXT

Series

Accession:: GSE55128

ID:: 200055128

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Select item 2000260132.

Exploration of the sulfur metabolism in the yeast Kluyveromyces lactis

(Submitter supplied) A comparison between high and low sulfur source supplies, i.e., sulfate, methionine or cystine, was carried out in order to identify key steps in the biosynthetic and catabolic pathways of the sulfur amino acids. the transcriptomic study was carried out using Agilent 8X15k slides with a custom oligoset designed by V. Loux using the Kluyveromyces lactisORFeome extracted from genolevures database

Organism:: Kluyveromyces lactis

Type:: Expression profiling by array

Platform:: GPL11307
18 Samples

Download data: TXT

Series

Accession:: GSE26013

ID:: 200026013

PubMed Similar studies Analyze with GEO2R

Select item 1000113073.

Agilent custom Kluyveromyces lactis 11K Array [G2509F]

(Submitter supplied) catalog number G2509F (november 2007), Custom Microarray GE 8X15K Custom Microarray GE 8x15K 60mer, sold in multiples of 1-1'x3' slides, 8 microarrays per slide oligoset design: /K. lactis /NRRL Y-1140 genome version 3 (S. Casaregola, personal communication) was used as a reference for microarray design. Probe design was performed using ROSO software completed with in-house scripts. ROSO takes a number of parameters into account to design effective oligonucleotide probes: (i) uniqueness among the genomes and lack of cross-hybridization against exclusion genomes; (ii) melting temperature (Tm); (iii) lack of secondary structures; and (iv) distance from the 3' end of the gene. more...

Organism:: Kluyveromyces lactis

2 Series
30 Samples

Platform

Accession:: GPL11307

ID:: 100011307

Select item 3013298944.

t-BOOHt-repetition4

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-30 min exposure to 0.25 mM tert-butyl hydroperoxide (t-BOOH) (channel 1) Klwt-30 min exposure to 0.25 mM tert-butyl hydroperoxide t-BOOH (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329894

ID:: 301329894

Select item 3013298935.

t-BOOHt-repetition3

Organism:: Kluyveromyces lactis

Source name:: Klwt-30 min exposure to 0.25 mM tert-butyl hydroperoxide t-BOOH (reference) (channel 1) Klyap8∆-30 min exposure to 0.25 mM tert-butyl hydroperoxide (t-BOOH) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329893

ID:: 301329893

Select item 3013298926.

t-BOOH-repetition2

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-30 min exposure to 0.25 mM tert-butyl hydroperoxide (t-BOOH) (channel 1) Klwt-30 min exposure to 0.25 mM tert-butyl hydroperoxide t-BOOH (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329892

ID:: 301329892

Select item 3013298917.

t-BOOH-repetition1

Organism:: Kluyveromyces lactis

Source name:: Klwt-30 min exposure to 0.25 mM tert-butyl hydroperoxide t-BOOH (reference) (channel 1) Klyap8∆-30 min exposure to 0.25 mM tert-butyl hydroperoxide (t-BOOH) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329891

ID:: 301329891

Select item 3013298908.

As(III) -repetition4

Organism:: Kluyveromyces lactis

Source name:: Klwt-30 min exposure to 25mM sodium arsenite As(III) (reference) (channel 1) Klyap8∆-30 min exposure to 25mM sodium arsenite (As(III)) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329890

ID:: 301329890

Select item 3013298899.

As(III) -repetition3

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-30 min exposure to 25mM sodium arsenite (As(III)) (channel 1) Klwt-30 min exposure to 25mM sodium arsenite As(III) (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329889

ID:: 301329889

Select item 30132988810.

As(III) -repetition2

Organism:: Kluyveromyces lactis

Source name:: Klwt-30 min exposure to 25mM sodium arsenite As(III) (reference) (channel 1) Klyap8∆-30 min exposure to 25mM sodium arsenite (As(III)) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329888

ID:: 301329888

Select item 30132988711.

As(III) -repetition1

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-30 min exposure to 25mM sodium arsenite (As(III)) (channel 1) Klwt-30 min exposure to 25mM sodium arsenite As(III) (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329887

ID:: 301329887

Select item 30132988612.

Untreated-repetition4

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-Untreated (channel 1) Klwt-Untreated (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329886

ID:: 301329886

Select item 30132988513.

Untreated-repetition3

Organism:: Kluyveromyces lactis

Source name:: Klwt-Untreated (reference) (channel 1) Klyap8∆-Untreated (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329885

ID:: 301329885

Select item 30132988414.

Untreated-repetition2

Organism:: Kluyveromyces lactis

Source name:: Klwt-Untreated (reference) (channel 1) Klyap8∆-Untreated (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329884

ID:: 301329884

Select item 30132988315.

Untreated-repetition1

Organism:: Kluyveromyces lactis

Source name:: Klyap8∆-Untreated (channel 1) Klwt-Untreated (reference) (channel 2)

Platform:: GPL11307
Series:: GSE55128

Download data: TXT

Sample

Accession:: GSM1329883

ID:: 301329883

Select item 30063830616.

Sulfate-repetition3-dye swap

Organism:: Kluyveromyces lactis

Source name:: growth on 0,1mM sulfate (channel 1) growth on 0,1µM sulfate (channel 2)

Platform:: GPL11307
Series:: GSE26013

Download data: TXT

Sample

Accession:: GSM638306

ID:: 300638306

Select item 30063830517.

Sulfate-repetition3

Organism:: Kluyveromyces lactis

Source name:: growth on 0,1mM sulfate (channel 1) growth on 0,1µM sulfate (channel 2)

Platform:: GPL11307
Series:: GSE26013

Download data: TXT

Sample

Accession:: GSM638305

ID:: 300638305

Select item 30063830418.

Sulfate-repetition2-dye swap

Organism:: Kluyveromyces lactis

Source name:: growth on 0,1mM sulfate (channel 1) growth on 0,1µM sulfate (channel 2)

Platform:: GPL11307
Series:: GSE26013

Download data: TXT

Sample

Accession:: GSM638304

ID:: 300638304

Select item 30063830319.

Sulfate-repetition2

Organism:: Kluyveromyces lactis

Source name:: growth on 0,1mM sulfate (channel 1) growth on 0,1µM sulfate (channel 2)

Platform:: GPL11307
Series:: GSE26013

Download data: TXT

Sample

Accession:: GSM638303

ID:: 300638303

Select item 30063830220.

Sulfate-repetition1-dye swap

Organism:: Kluyveromyces lactis

Source name:: growth on 0,1mM sulfate (channel 1) growth on 0,1µM sulfate (channel 2)

Platform:: GPL11307
Series:: GSE26013

Download data: TXT

Sample

Accession:: GSM638302

ID:: 300638302

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GPL11307[Accession] (33)
GEO DataSets
androgen receptor alpha, partial [Xenopus laevis]
androgen receptor alpha, partial [Xenopus laevis]
gi|985559159|gb|AMD10772.1|

Protein
Arthrobacter sp. Desert1 16S ribosomal RNA gene, partial sequence
Arthrobacter sp. Desert1 16S ribosomal RNA gene, partial sequence
gi|325296019|gb|HQ711456.1|

Nucleotide
manose-6-phosphate isomerase, partial [Rhogeessa io]
manose-6-phosphate isomerase, partial [Rhogeessa io]
gi|165978336|gb|ABY76587.1|

Protein
Pseudomonas aeruginosa strain F27 NODE_32_length_28270_cov_95.420282, whole geno...
Pseudomonas aeruginosa strain F27 NODE_32_length_28270_cov_95.420282, whole genome shotgun sequence
gi|2790057357|ref|NZ_JAUEFU01000003 gnl|WGS:NZ_JAUEFU01|NODE_32_length_28270_cov_95.420282

Nucleotide

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