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Items: 11

1.

The RNA polymerase II CTD phosphatase SSUP-72 regulates alternative polyadenylation in C. elegans neurons.

(Submitter supplied) Alternative polyadenylation (APA) plays important roles in generating transcriptomediversity. In the nervous system widespread APA are observed in development and activity-mediated neural plasticity. However, the underlying molecular mechanisms are largely unknown. Through systematic genetic studies and genome-wide survey of transcriptional landscape, here, we report a mechanism controlling APA of two neuronal genes, UNC-44/Ankyrin and DLK-1/MAPKK, during development of C. more...
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL14832
4 Samples
Download data: TXT
Series
Accession:
GSE67649
ID:
200067649

SRA Run Selector

2.

Comprehensive assembly and spatio-temporal analysis of the C. elegans 3' UTRome through isolation and sequencing of 3'UTRs in germline-dereived cell types and somatic tissues.

(Submitter supplied) Our computational analyses of sequencing depth and the discovery rates of sequence elements in the 3’UTR strongly demonstrate that interrogation of the 3’UTRome in specific tissues and cell types across development will greatly expand the identification of new 3’UTR isoforms and the sequence elements therein. Therefore, we will generate and sequence the 3’UTRs from the cell types isolated from the developing germline, mature germ cells, and early embryogenesis. more...
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing
Platform:
GPL14832
4 Samples
Download data: FNA, PSL, TXT
Series
Accession:
GSE33431
ID:
200033431

SRA Run Selector

3.

454 GS FLX Titanium (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
2 Series
8 Samples
Download data
Platform
Accession:
GPL14832
ID:
100014832

4.

C24741_G07ZQ7Q02

Organism:
Caenorhabditis elegans
Source name:
Whole worm RNA extraction
Platform:
GPL14832
Series:
GSE67649
Download data
Sample
Accession:
GSM1652670
ID:
301652670

SRA Run Selector

5.

C24741_GVN0EHB02

Organism:
Caenorhabditis elegans
Source name:
Whole worm RNA extraction
Platform:
GPL14832
Series:
GSE67649
Download data
Sample
Accession:
GSM1652669
ID:
301652669

SRA Run Selector

6.

N2_G07ZQ5M02

Organism:
Caenorhabditis elegans
Source name:
Whole worm RNA extraction
Platform:
GPL14832
Series:
GSE67649
Download data
Sample
Accession:
GSM1652668
ID:
301652668

SRA Run Selector

7.

N2_GVN0EHB01

Organism:
Caenorhabditis elegans
Source name:
Whole worm RNA extraction
Platform:
GPL14832
Series:
GSE67649
Download data
Sample
Accession:
GSM1652667
ID:
301652667

SRA Run Selector

8.

L4_STAGE_GVOZ88J01

Organism:
Caenorhabditis elegans
Source name:
L4
Platform:
GPL14832
Series:
GSE33431
Download data: FNA
Sample
Accession:
GSM826900
ID:
300826900

SRA Run Selector

9.

L3_STAGE_GVL4R4202

Organism:
Caenorhabditis elegans
Source name:
L3
Platform:
GPL14832
Series:
GSE33431
Download data: FNA
Sample
Accession:
GSM826899
ID:
300826899

SRA Run Selector

10.

mya-3__PABP_L2_STAGE_GVL4R4201

Organism:
Caenorhabditis elegans
Source name:
L2
Platform:
GPL14832
Series:
GSE33431
Download data: FNA
Sample
Accession:
GSM826898
ID:
300826898

SRA Run Selector

11.

GRAVID_STAGE_GVOZ88J02

Organism:
Caenorhabditis elegans
Source name:
gravid
Platform:
GPL14832
Series:
GSE33431
Download data: FNA
Sample
Accession:
GSM826897
ID:
300826897

SRA Run Selector

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