GEO DataSets

(Submitter supplied) Comparison of small RNA profiles across nematode evolution

Organism:

Romanomermis culicivorax; Nippostrongylus brasiliensis; Hypsibius dujardini; Brugia malayi; Globodera pallida; Pristionchus pacificus; Enoplus brevis; Paragordius varius; Caenorhabditis elegans; Trichinella spiralis; Odontophora rectangula

Type:

Non-coding RNA profiling by high throughput sequencing

11 related Platforms

22 Samples

Download data: FA, FASTA

(Submitter supplied) The overall goal of this investigation was to investigate X-content of sex-biased genes in several nematode species. The following species of nematode were investigated: *C. elegans, *N2; *C. brenneri, *PB2801; *C. briggsae, *AF16; *C. remanei*, PB4641; *P. **pacificus, *PS312*.* Genomic DNA sequencing data was used to assign X and autosomal - linkage to unassembled sequencing contigs. Male and female RNA seq data was then generated and used to determine sex-biased expression. more...

Organism:

Caenorhabditis briggsae; Caenorhabditis brenneri; Caenorhabditis remanei; Caenorhabditis elegans; Pristionchus pacificus

Type:

Expression profiling by high throughput sequencing; Other

5 related Platforms

31 Samples

Download data: BEDGRAPH, FPKM_TRACKING

(Submitter supplied) Animal development is complex yet surprisingly robust. Animals may develop alternative phenotypes conditional on environmental changes. Under unfavorable conditions C. elegans larvae enter the dauer stage, a developmentally arrested, long-lived, and stress-resistant state. Dauer larvae of free-living nematodes and infective larvae of parasitic nematodes share many traits including a conserved endocrine signaling module (DA/DAF-12), which is essential for the formation of dauer and infective larvae. more...

Organism:

Pristionchus pacificus; Caenorhabditis elegans; Strongyloides ratti

Type:

Non-coding RNA profiling by high throughput sequencing

7 related Platforms

10 Samples

Download data: TXT