GEO DataSets

(Submitter supplied) We report the application of high-throughput RNA sequencing for comparing the expression levels of the coding and long noncoding RNAs (lncRNAs) in leaf samples from a glossy mutant nwgl and its wild-type (WT) in cabbage. By obtaining over 163.35 Gb cleaned data generated from six libraries (on average, more than 26.48 Gb clean data for each sample replicate), we identified 1247 differential expressed genes (DEGs) and 148 differential expressed lncRNAs in nwgl leaves relative to WT. more...

Organism:

Brassica oleracea var. capitata

Type:

Expression profiling by high throughput sequencing

Platform:

GPL16893

6 Samples

Download data: TXT

(Submitter supplied) Plant microRNAs are short (~21 nt), non-coding molecules that regulate gene expression by targeting mRNA cleavage or protein translation inhibition. In this manner, they play many important roles in the cells of living organisms. One of the plant species in which the entire set of miRNAs has not been yet completely identified is Brassica oleracea var. capitata (cabbage). For this reason and for the economic and nutritional importance of this food crop, Illumina high-throughput small RNAs sequencing has been performed to discover novel and conserved miRNAs in the mature cabbage leaves. more...

Organism:

Brassica oleracea var. capitata

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL16893

3 Samples

Download data: FASTA