GPL19041[Accession] - GEO DataSets - NCBI

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Items: 13

Select item 2000600921.

MNase-chip of maize B73

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Zea mays

Type:: Genome binding/occupancy profiling by genome tiling array

Platforms:: GPL19041 GPL19042
34 Samples

Download data: PAIR

Series

Accession:: GSE60092

ID:: 200060092

PubMed Full text in PMC Similar studies

Select item 2000600892.

MNase-chip of maize B73 immature ears, seedling shoots, and seedling roots

(Submitter supplied) The eukaryotic nuclear genome is organized into the fundamental units of chromatin, nucleosomes. The positions and biochemical states of nucleosomes on DNA can regulate protein-DNA interactions, and in turn influence DNA-templated events. Despite the increasing number of genome-wide maps of nucleosome position, how global changes in nucleosome position relate to changes in gene expression is poorly understood. more...

Organism:: Zea mays

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL19041
10 Samples

Download data: PAIR, TSV

Series

Accession:: GSE60089

ID:: 200060089

PubMed Full text in PMC Similar studies

Select item 1000190413.

NimbleGen Maize high-density big-block Array [111208_Zmay_B73_GH_CGH]

(Submitter supplied) B73v2 (AGP_v2, maizesequence.org) Zea Mays L. B73 cultivar Designname: 111208_Zmay_B73_GH_CGH Designid: 563161 Protocol: Isothermal 49-74 bp probes derived from the B73v2 geome assembly (AGP_v2) at ~18 bp spacing surrounding 3kb of 389 TSSs from the Classical Maize Genes

Organism:: Zea mays

2 Series
10 Samples

Download data: GFF, NCD, NDF, POS

Platform

Accession:: GPL19041

ID:: 100019041

Select item 3014648584.

Organism:: Zea mays

Source name:: nucleosomal DNA from lightly-digested seedling shoot nuclei (channel 1) bare genomic DNA from seedling shoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464858

ID:: 301464858

Select item 3014648575.

Organism:: Zea mays

Source name:: nucleosomal DNA from heavily-digested seedling shoot nuclei (channel 1) bare genomic DNA from seedling shoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464857

ID:: 301464857

Select item 3014648566.

Organism:: Zea mays

Source name:: nucleosomal DNA from lightly-digested seedling root nuclei (channel 1) bare genomic DNA from seedling root nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464856

ID:: 301464856

Select item 3014648557.

Organism:: Zea mays

Source name:: nucleosomal DNA from heavily-digested seedling root nuclei (channel 1) bare genomic DNA from seedling root nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464855

ID:: 301464855

Select item 3014648548.

EARSHOOT_MODERATE_REP2

Organism:: Zea mays

Source name:: nucleosomal DNA from moderately-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464854

ID:: 301464854

Select item 3014648539.

EARSHOOT_MODERATE_REP1

Organism:: Zea mays

Source name:: nucleosomal DNA from moderately-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464853

ID:: 301464853

Select item 30146485210.

EARSHOOT_LIGHT_REP2

Organism:: Zea mays

Source name:: nucleosomal DNA from lightly-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464852

ID:: 301464852

Select item 30146485111.

EARSHOOT_LIGHT_REP1

Organism:: Zea mays

Source name:: nucleosomal DNA from lightly-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464851

ID:: 301464851

Select item 30146485012.

EARSHOOT_HEAVY_REP2

Organism:: Zea mays

Source name:: nucleosomal DNA from heavily-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464850

ID:: 301464850

Select item 30146484913.

EARSHOOT_HEAVY_REP1

Organism:: Zea mays

Source name:: nucleosomal DNA from heavily-digested earshoot nuclei (channel 1) bare genomic DNA from earshoot nuclei (channel 2)

Platform:: GPL19041
Series:: GSE60089 GSE60092

Download data: PAIR

Sample

Accession:: GSM1464849

ID:: 301464849

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