GPL19800[RGSE] - GEO DataSets

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Items: 3

Select item 2001462081.

Functional subnetwork modules and discovery of hub genes with signal peptide using RNA-Seq (hybrid 33k44 vs. inbred B73)

(Submitter supplied) We performed a systematic computational network-based analysis of large-scale F. verticillioides RNA-seq datasets to identify gene subnetwork modules associated with virulence and fumonisin regulation.

Organism:: Fusarium verticillioides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19800
107 Samples

Download data: TXT

Series

Accession:: GSE146208

ID:: 200146208

SRA Run Selector

Select item 2001163512.

Analysis of Fusarium verticillioides gene expression in response to lactam and lactone compounds

(Submitter supplied) Investigation of whole transcriptional changes in F. verticillioides FRC M-3125 when exposed to 5 μg/ml pyrrocidine A (PA), 20 μg/ml pyrrocidine B (PB), 50 μg/ml 2-benzoxazolinone (BOA), 50 μg/ml 2-oxindole (OXD), 50 μg/ml 2-coumaranone (CMN), or 50 μg/ml chlorzoxazone (CZX). Cultures were harvested one hour after exposure. Assessed in reference to control cultures of M-3125 exposed to DMSO (0.5% final concentration) since all the above compounds were dissolved in DMSO.

Organism:: Fusarium verticillioides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19800
21 Samples

Download data: TXT

Series

Accession:: GSE116351

ID:: 200116351

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000660443.

Transcriptome changes in Fusarium verticillioides caused by mutation in the transporter-like gene FST1

(Submitter supplied) An gene-expression comparison of the wild type and strain delta-fst1 of Fusarium verticillioides grown on autoclaved maize kernels for six days was conducted.