Diversity of cytosine methylation across the fungi tree of life - - GEO DataSets

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Diversity of cytosine methylation across the fungi tree of life

(Submitter supplied) Cytosine methylation is a conserved base modification, but explanations for its interspecific variation remain elusive. Only through taxonomic sampling of disparate groups can unifying explanations for interspecific variation be thoroughly tested. Here we leverage phylogenetic resolution of cytosine DNA methyltransferases (DNA MTases) and genome evolution to better understand widespread interspecific variation across 40 diverse fungal species. more...

Organism:: Agaricus bisporus; Mixia osmundae; Sporobolomyces roseus; Cordyceps militaris; Wolfiporia cocos; Spinellus fusiger; Hesseltinella vesiculosa; Microbotryum lychnidis-dioicae; Heterobasidion irregulare; Phycomyces blakesleeanus; Fusarium fujikuroi; Neurospora crassa; Pleurotus ostreatus; Aureobasidium pullulans; Laccaria bicolor; Uncinocarpus reesii; Parasitella parasitica; Botrytis cinerea; Tilletiopsis washingtonensis; Plenodomus lingam; Candida albicans; Coemansia reversa; Postia placenta; Coemansia spiralis; Kirkomyces cordensis; Metarhizium robertsii; Pseudogymnoascus destructans; Saccharomyces cerevisiae; Aspergillus flavus; Coprinopsis cinerea; Clavispora lusitaniae; Lobosporangium transversale; Radiomyces spectabilis; Flammula alnicola; Cryptococcus neoformans var. grubii; Candidozyma auris; Pyricularia oryzae KJ201; Syncephalis fuscata; Podospora anserina; Phanerodontia chrysosporium

Type:: Methylation profiling by high throughput sequencing; Third-party reanalysis

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31 Samples

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Accession:: GSE112636

ID:: 200112636

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GPL24823[RGSE] (1)
GEO DataSets
Diversity of cytosine methylation across the fungi tree of life
Diversity of cytosine methylation across the fungi tree of life
Accession: GSE112636

GEO DataSets
UI-M-AJ1-ahf-a-08-0-UI.s2 NIH_BMAP_MOB_N Mus musculus cDNA clone UI-M-AJ1-ahf-a-...
UI-M-AJ1-ahf-a-08-0-UI.s2 NIH_BMAP_MOB_N Mus musculus cDNA clone UI-M-AJ1-ahf-a-08-0-UI 3', mRNA sequence
gi|5488426|gnl|dbEST|2932840|gb|AI8 .1|

Nucleotide
SAMN33744438 (1)
SRA
methyl-accepting chemotaxis protein [Lysinibacillus sp. ACHW1.5]
methyl-accepting chemotaxis protein [Lysinibacillus sp. ACHW1.5]
gi|2189865263|gnl|PRJNA801789|L6W14 5|gb|UKJ47747.1|

Protein

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