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Items: 2

1.

Enterococcus Grad-seq and KhpB RIP-seq

(Submitter supplied) We investigated the RNA-protein interactome of Enterococcus faecalis V583 and Enterococcus faecium Aus0004 by native gradient fractionation of complexes coupled to RNA-sequencing. Whole bacterial cell lysates were analysed by size and density in a glycerol gradient. At native conditions, RNA-protein complexes stay intact and sediment as a whole. Sedimentation profiles of individual RNAs appear correlated in case of interaction in a complex. more...
Organism:
Enterococcus faecalis V583; Enterococcus faecium Aus0004
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL25048 GPL25049
46 Samples
Download data: FASTA, GFF, WIG
Series
Accession:
GSE196534
ID:
200196534

PubMed Full text in PMC Similar studies

2.

Transcriptome mapping of Enterococcus faecalis and Enterococcus faecium

(Submitter supplied) The enterococci comprise a genus of 49 low-GC content Gram-positive commensal species within the Firmicutes phylum that are known to occupy diverse habitats, notably the gastrointestinal core microbiota of nearly every phylum, including human. Of particular clinical relevance are two rogue species of enterococci, Enterococcus faecalis and the distantly related Enterococcus faecium, standing among the nefarious multi-drug resistant and hospital-acquired pathogens. more...
Organism:
Enterococcus faecium Aus0004; Enterococcus faecalis V583
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL25048 GPL25049
12 Samples
Download data: WIG
Series
Accession:
GSE115009
ID:
200115009

PubMed Full text in PMC Similar studies SRA Run Selector

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db=gds|term=GPL25048[RGSE]|query=13|qty=3|blobid=MCID_672e2f31ad0a37579f491c3c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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