GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Human immunodeficiency virus 1; Measles virus strain Schwarz; Homo sapiens; dengue virus type 4; Measles morbillivirus

Type:

Expression profiling by high throughput sequencing

5 related Platforms

114 Samples

Download data: TXT

(Submitter supplied) Pattern recognition receptors (PRRs) protect against host invasion by detecting specific molecular patterns found in pathogens and initiating an immune response. While microbial-derived PRR ligands have been extensively characterized, the contribution and relevance of endogenous ligands to PRR activation during viral infection remain overlooked. In this work, we characterize the landscape of endogenous ligands that engage RIG-I-like receptors upon infection by a positive-sense RNA virus, a negative-sense RNA virus or a retrovirus. more...

Organism:

Human immunodeficiency virus 1; Homo sapiens

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26693

24 Samples

Download data: TXT

(Submitter supplied) The goal of this set of experiments is to determine the structure of HIV-1 NL4-3 and NHG RNA structure using a novel algorithm that allows for the identification of multiple RNA folding conformations. The input data used for this algorithm is DMS-MaPseq data. We focused on two specific areas of the HIV-1 genome, the Rev Response Element (RRE) and A3 splice acceptor site, as well as probing the whole HIV-1 genome. more...

Organism:

Vibrio vulnificus; Homo sapiens; synthetic construct; Human immunodeficiency virus 1

Type:

Other

7 related Platforms

23 Samples

Download data: TXT