RNA-seq of human gut Bacteroides xylanisolvens and Bacteroides ovatus isolates grown on mucin O-linked glycans compared to glucose - - GEO DataSets

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RNA-seq of human gut Bacteroides xylanisolvens and Bacteroides ovatus isolates grown on mucin O-linked glycans compared to glucose

(Submitter supplied) Purpose: Examining the transcriptome of human gut bacteria (Bacteroides xylanisolvens/Bacteroides ovatus) that grow on mucin O-linked glycans as a sole carbon source Methods: Strains were grown on 10 mg/ml mucin O-linked glycans (MOG) or 5 mg/ml glucose as a sole carbon source in vitro. Fold change was calculated as MOG over glucose. Once cells reached an optical density corresponding to mid-log phase growth, RNA was isolated and rRNA depleted. more...

Organism:: Bacteroides ovatus; Bacteroides xylanisolvens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL28983 GPL21072
24 Samples

Download data: XLSX

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Accession:: GSE155869

ID:: 200155869

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RNA-seq of human gut Bacteroides xylanisolvens and Bacteroides ovatus isolates g...
RNA-seq of human gut Bacteroides xylanisolvens and Bacteroides ovatus isolates grown on mucin O-linked glycans compared to glucose
Accession: GSE155869

GEO DataSets
GPL28983[RGSE] (1)
GEO DataSets
elongation factor 1 alpha, partial [Cinara atra]
elongation factor 1 alpha, partial [Cinara atra]
gi|39986055|gb|AAR36880.1|

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