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Items: 4

1.

Transcription factor shapes chromosomal conformation and regulates gene expression in bacterial adaptation [RNA-Seq]

(Submitter supplied) Genomic mutations allow bacteria to adapt rapidly to adverse stress environments. The three-dimensional conformation of the genome also may plays an important role in transcriptional regulation and environmental adaptation. Here, using chromosome conformation capture, we investigate the high-order architecture of the Zymomonas mobilis chromosome in response to genomic mutant and ambient stimuli (acetic acid and furfural, derived from lignocellulosic hydrolysate). more...
Organism:
Zymomonas mobilis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32966
15 Samples
Download data: TXT
Series
Accession:
GSE221498
ID:
200221498
2.

Transcription factor shapes chromosomal conformation and regulates gene expression in bacterial adaptation [Hi-C]

(Submitter supplied) Genomic mutations allow bacteria to adapt rapidly to adverse stress environments. The three-dimensional conformation of the genome also may plays an important role in transcriptional regulation and environmental adaptation. Here, using chromosome conformation capture, we investigate the high-order architecture of the Zymomonas mobilis chromosome in response to genomic mutant and ambient stimuli (acetic acid and furfural, derived from lignocellulosic hydrolysate). more...
Organism:
Zymomonas mobilis
Type:
Other
Platform:
GPL32966
10 Samples
Download data: MCOOL, TXT
Series
Accession:
GSE221497
ID:
200221497
3.

Transcription factor shapes chromosomal conformation and regulates gene expression in bacterial adaptation [ChIP-Seq]

(Submitter supplied) Genomic mutations allow bacteria to adapt rapidly to adverse stress environments. The three-dimensional conformation of the genome also may play an important role in transcriptional regulation and environmental adaptation. Here, using chromosome conformation capture, we investigate the high-order architecture of the Zymomonas mobilis chromosome in response to genomic mutant and ambient stimuli (acetic acid and furfural, derived from lignocellulosic hydrolysate). more...
Organism:
Zymomonas mobilis
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL32966
10 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE221496
ID:
200221496
4.

Transcription factor shapes chromosomal conformation and regulates gene expression in bacterial adaptation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Zymomonas mobilis
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing
Platform:
GPL32966
35 Samples
Download data: BW, NARROWPEAK, TXT
Series
Accession:
GSE221499
ID:
200221499
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Supplemental Content

db=gds|term=GPL32966[RGSE]|query=1|qty=2|blobid=MCID_66a52b4535886f3a581e4d93|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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