GPL33427[Accession] - GEO DataSets - NCBI

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Select item 2002332201.

Genomic innovation and horizontal gene transfer shaped plant colonization and biomass degradation strategies of a globally prevalent fungal pathogen

(Submitter supplied) Members of the fungal genus Armillaria are necrotrophic pathogens with efficient plant biomass-degrading strategies. Armillaria species are some of the largest terrestrial organisms on Earth that cause tremendous losses in diverse ecosystems. Despite their global importance, how Armillaria evolved pathogenicity in a clade of dominantly non-pathogenic wood-degraders (Agaricales) remains elusive. Here, using new genomic data, we show that Armillaria species, in addition to widespread gene duplications and de novo gene origins, acquired at least 1,025 genes via 124 horizontal gene transfer (HGT) events, primarily from Ascomycota donors. more...

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL33426 GPL20030 GPL33427
28 Samples

Download data: TXT

Series

Accession:: GSE233220

ID:: 200233220

PubMed Full text in PMC Similar studies

Select item 1000334272.

Illumina HiSeq 2500 (Armillaria luteobubalina; Eucalyptus grandis)

Organism:: Eucalyptus grandis; Armillaria luteobubalina

1 Series
20 Samples

Platform

Accession:: GPL33427

ID:: 100033427

Select item 3074131483.

Eucalypt+Armillaria_2wk_JW24

Organism:: Armillaria luteobubalina; Eucalyptus grandis

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413148

ID:: 307413148

SRA Run Selector

Select item 3074131474.

Eucalypt+Armillaria_2wk_JW23

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413147

ID:: 307413147

SRA Run Selector

Select item 3074131465.

Eucalypt+Armillaria_2wk_JW22

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413146

ID:: 307413146

SRA Run Selector

Select item 3074131456.

Eucalypt+Armillaria_2wk_JW21

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413145

ID:: 307413145

SRA Run Selector

Select item 3074131447.

Eucalypt+Armillaria_1wk_JW20

Organism:: Armillaria luteobubalina; Eucalyptus grandis

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413144

ID:: 307413144

SRA Run Selector

Select item 3074131438.

Eucalypt+Armillaria_1wk_JW19

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413143

ID:: 307413143

SRA Run Selector

Select item 3074131429.

Eucalypt+Armillaria_1wk_JW18

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413142

ID:: 307413142

SRA Run Selector

Select item 30741314110.

Eucalypt+Armillaria_1wk_JW17

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413141

ID:: 307413141

SRA Run Selector

Select item 30741314011.

Eucalypt+Armillaria_48h_JW16

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413140

ID:: 307413140

SRA Run Selector

Select item 30741313912.

Eucalypt+Armillaria_48h_JW15

Organism:: Armillaria luteobubalina; Eucalyptus grandis

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413139

ID:: 307413139

SRA Run Selector

Select item 30741313813.

Eucalypt+Armillaria_48h_JW14

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413138

ID:: 307413138

SRA Run Selector

Select item 30741313714.

Eucalypt+Armillaria_48h_JW13

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413137

ID:: 307413137

SRA Run Selector

Select item 30741313615.

Eucalypt+Armillaria_24h_presymbiosis_JW12

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Presymbiosis root and mycelium

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413136

ID:: 307413136

SRA Run Selector

Select item 30741313516.

Eucalypt+Armillaria_24h_presymbiosis_JW11

Organism:: Armillaria luteobubalina; Eucalyptus grandis

Source name:: Presymbiosis root and mycelium

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413135

ID:: 307413135

SRA Run Selector

Select item 30741313417.

Eucalypt+Armillaria_24h_presymbiosis_JW10

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Presymbiosis root and mycelium

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413134

ID:: 307413134

SRA Run Selector

Select item 30741313318.

Eucalypt+Armillaria_24h_presymbiosis_JW9

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Presymbiosis root and mycelium

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413133

ID:: 307413133

SRA Run Selector

Select item 30741313219.

Eucalypt+Armillaria_24h_JW8

Organism:: Armillaria luteobubalina; Eucalyptus grandis

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413132

ID:: 307413132

SRA Run Selector

Select item 30741313120.

Eucalypt+Armillaria_24h_JW7

Organism:: Eucalyptus grandis; Armillaria luteobubalina

Source name:: Symbiotic tissue

Platform:: GPL33427
Series:: GSE233220

Sample

Accession:: GSM7413131

ID:: 307413131

SRA Run Selector

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GPL33427[Accession] (22)
GEO DataSets
Zea mays O-methyltransferase (comt) gene, complete cds.
Zea mays O-methyltransferase (comt) gene, complete cds.
PopSet: 33641703

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txid4577[orgn] AND "cultivar inbred line F288"[All Fields] (1)
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txid4577[orgn] AND "cultivar CIMMYT 9477"[All Fields] (2)
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