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Items: 7

1.

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

(Submitter supplied) Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides, and aligning to genome assemblies from related, modern species. Here, we report that skin from a female woolly mammoth (†Mammuthus primigenius) which died 52,000 years ago retained its ancient genome architecture. We use PaleoHi-C to map chromatin contacts and assemble its genome, yielding twenty-eight chromosome-length scaffolds. more...
Organism:
Homo sapiens; Bos taurus; Elephas maximus indicus; Equus asinus; Mammuthus primigenius
Type:
Other; Third-party reanalysis
10 related Platforms
136 Samples
Download data: BED, BEDGRAPH, BEDPE, FASTA, HIC, SW, TXT, XLSX
Series
Accession:
GSE268050
ID:
200268050
2.

NextSeq 550 (Elephas maximus indicus)

Organism:
Elephas maximus indicus
1 Series
5 Samples
Download data
Platform
Accession:
GPL34508
ID:
100034508
3.

Hi-C of Elephas maximus indicus DNA Zoo Sample3070

Organism:
Elephas maximus indicus
Source name:
skin
Platform:
GPL34508
Series:
GSE268050
Download data
Sample
Accession:
GSM8285031
ID:
308285031
4.

Hi-C of Elephas maximus DNA Zoo Sample3070

Organism:
Elephas maximus indicus
Source name:
skin
Platform:
GPL34508
Series:
GSE268050
Download data
Sample
Accession:
GSM8285030
ID:
308285030
5.

Hi-C of Elephas maximus DNA Zoo Sample3085

Organism:
Elephas maximus indicus
Source name:
ovary
Platform:
GPL34508
Series:
GSE268050
Download data
Sample
Accession:
GSM8285029
ID:
308285029
6.

Hi-C of Elephas maximus DNA Zoo Sample3076

Organism:
Elephas maximus indicus
Source name:
liver
Platform:
GPL34508
Series:
GSE268050
Download data
Sample
Accession:
GSM8285028
ID:
308285028
7.

Hi-C of Elephas maximus DNA Zoo Sample3074

Organism:
Elephas maximus indicus
Source name:
brain
Platform:
GPL34508
Series:
GSE268050
Download data
Sample
Accession:
GSM8285027
ID:
308285027
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Supplemental Content

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