GPL4028[Accession] - GEO DataSets

Select item 2000054011.

Aromatics Degradation in Geobacter metallireducens

(Submitter supplied) Geobacter metallireducens serves as the model for Geobacter species that anaerobically oxidize aromatic contaminants with the reduction of Fe(III) oxides in contaminated sediments. Analysis of the complete G. metallireducens genome sequence revealed a 307 kb region, designated the aromatics island, not found in closely related species that do not degrade aromatics. This region encoded enzymes for the degradation of benzoate and other aromatic compounds with the exception of the genes for the conversion of toluene to benzyol-CoA which were in a different region of the genome. more...

Organism:: Geobacter metallireducens GS-15

Type:: Expression profiling by array

Platform:: GPL4028
12 Samples

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Series

Accession:: GSE5401

ID:: 200005401

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000040282.

ORNL-ESD Geobacter metallireducens 70mer oligo-array

(Submitter supplied) In total, 4129 probes were designed based on an early version of the gene model (2003) and printed on the microarray, among which 3727 probes have 1 perfect match with one single ORF; 98 probes have more than 1 perfect matches with more than 1 ORFs; 261 probes have at least 1 perfect match with the genome, but not with an ORF; and 43 probes have no perfect match with the genome. Protocol: All 70mer oligonucleotides were commercially synthesized without modification by MWG Biotech Inc. more...

Organism:: Geobacter metallireducens GS-15

1 Series
12 Samples

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Platform

Accession:: GPL4028

ID:: 100004028

Select item 3001234633.

Geobacter Ben-Ac slide L

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123463

ID:: 300123463

Select item 3001234624.

Geobacter Ben-Ac slide K

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123462

ID:: 300123462

Select item 3001234615.

Geobacter Ben-Ac slide J

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123461

ID:: 300123461

Select item 3001234606.

Geobacter Ben-Ac slide F

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123460

ID:: 300123460

Select item 3001234597.

Geobacter Ben-Ac slide E

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123459

ID:: 300123459

Select item 3001234588.

Geobacter Ben-Ac slide D

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123458

ID:: 300123458

Select item 3001234579.

Geobacter Ben-Ac slide I

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123457

ID:: 300123457

Select item 30012345610.

Geobacter Ben-Ac slide H

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123456

ID:: 300123456

Select item 30012345511.

Geobacter Ben-Ac slide G

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

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Sample

Accession:: GSM123455

ID:: 300123455

Select item 30012333312.

Geobacter Ben-Ac slide B

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

Download data: TIFF

Sample

Accession:: GSM123333

ID:: 300123333

Select item 30012333213.

Geobacter Ben-Ac slide A

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

Download data: TIFF

Sample

Accession:: GSM123332

ID:: 300123332

Select item 30012272714.

Geobacter Ben-Ac slide C

Organism:: Geobacter metallireducens GS-15

Source name:: Geobacter metallireducens with benzoate as electron donor (channel 1) Geobacter metallireducens with acetate as electron donor (channel 2)

Platform:: GPL4028
Series:: GSE5401

Download data: TIFF

Sample

Accession:: GSM122727

ID:: 300122727

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