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Select item 2001293631.

Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue

(Submitter supplied) The complex relationship between metabolic disease risk and body fat distribution in humans involves cellular characteristics which are specific to each body fat compartment. We applied single-cell RNA sequencing (scRNA-Seq) to identify these depot-specific differences in the stromal vascular fraction of visceral (VAT) and subcutaneous (SAT) adipose tissue of obese individuals. We characterized multiple immune cells, endothelial cells, fibroblasts, adipose and hematopoietic stem cell progenitors. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24676 GPL20301
32 Samples

Download data: MTX, TSV, TXT

Series

Accession:: GSE129363

ID:: 200129363

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000246762.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

14438 Series
876392 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 1000203013.

Illumina HiSeq 4000 (Homo sapiens)

Organism:: Homo sapiens

8086 Series
186063 Samples

Platform

Accession:: GPL20301

ID:: 100020301

Select item 3037117884.

AT-22-SAT-CD34+

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711788

ID:: 303711788

SRA Run Selector

Select item 3037117875.

AT-22-VAT-CD34+

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711787

ID:: 303711787

SRA Run Selector

Select item 3037117866.

AT-22-VAT-CD34-

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711786

ID:: 303711786

SRA Run Selector

Select item 3037117857.

AT-21-SAT-CD34+

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711785

ID:: 303711785

SRA Run Selector

Select item 3037117848.

AT-21-SAT-CD34-

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711784

ID:: 303711784

SRA Run Selector

Select item 3037117839.

AT-21-VAT-CD34+

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711783

ID:: 303711783

SRA Run Selector

Select item 30371178210.

AT-21-VAT-CD34-

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL24676
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711782

ID:: 303711782

SRA Run Selector

Select item 30371178111.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711781

ID:: 303711781

SRA Run Selector

Select item 30371178012.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711780

ID:: 303711780

SRA Run Selector

Select item 30371177913.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711779

ID:: 303711779

SRA Run Selector

Select item 30371177814.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711778

ID:: 303711778

SRA Run Selector

Select item 30371177715.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711777

ID:: 303711777

SRA Run Selector

Select item 30371177616.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711776

ID:: 303711776

SRA Run Selector

Select item 30371177517.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711775

ID:: 303711775

SRA Run Selector

Select item 30371177418.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711774

ID:: 303711774

SRA Run Selector

Select item 30371177319.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711773

ID:: 303711773

SRA Run Selector

Select item 30371177220.

Organism:: Homo sapiens

Source name:: adipose derived stromal vascular fraction (SVF)

Platform:: GPL20301
Series:: GSE129363 GSE136230

Sample

Accession:: GSM3711772

ID:: 303711772

SRA Run Selector

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GSE129363[Accession] (35)
GEO DataSets
SAMN06477688 (1)
BioSample
SC_12week
SC_12week

biosample
unclassified Fungi 18S ribosomal RNA gene, partial sequence; internal transcribe...
unclassified Fungi 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
PopSet: 223005971

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PopSet Links for Nucleotide (Select 223006409) (1)
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