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Items: 18

1.

HD-ZIP IV transcription factor OCL4 and 21-nt phasiRNAs are dispensable for male fertility in maize anthers

(Submitter supplied) The maize ocl4 mutants showed differing levels of male sterility, which seems correlating with the quantity of 21-nt phasiRNA remaining during pre-meiotic stage. In this case, sRNA and transcriptome was profiled and compared in this study, showed that OCL4 and 21-nt phasiRNAs are dispensable for male fertility in maize anthers.
Organism:
Zea mays
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL15463
16 Samples
Download data: TXT
Series
Accession:
GSE150446
ID:
200150446
2.

Illumina HiSeq 2000 (Zea mays)

Platform
Accession:
GPL15463
ID:
100015463
3.

ocl4 maize anthers, 0.4 to 0.7 mm, fertile phenotype (score = 4); sample ZOO 21 #36 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550690
ID:
304550690
4.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 1); sample ZOO 21 #35 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550689
ID:
304550689
5.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 2); sample ZOO 16#2 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550688
ID:
304550688
6.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 1); sample ZOO 19#24 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550687
ID:
304550687
7.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 19 #23 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550686
ID:
304550686
8.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 16 #6 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550685
ID:
304550685
9.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 19 #28 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550684
ID:
304550684
10.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 16#1 (small RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550683
ID:
304550683
11.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 2); sample ZOO 16#2 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550682
ID:
304550682
12.

ocl4 maize anthers, 0.4 to 0.7 mm, fertile phenotype (score = 4); sample ZOO 21 #36 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550681
ID:
304550681
13.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 1); sample ZOO 21 #35 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550680
ID:
304550680
14.

ocl4 maize anthers, 0.4 to 0.7 mm, partial fertile phenotype (score = 1); sample ZOO 19#24 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550679
ID:
304550679
15.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 19 #23 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550678
ID:
304550678
16.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 16 #6 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550677
ID:
304550677
17.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 19 #28 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550676
ID:
304550676
18.

ocl4 maize anthers, 0.4 to 0.7 mm, sterile phenotype (score = 0); sample ZOO 16 #1 (RNA-seq)

Organism:
Zea mays
Source name:
dissected maize whole anthers
Platform:
GPL15463
Series:
GSE150446
Download data: TXT
Sample
Accession:
GSM4550675
ID:
304550675
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