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Items: 10

1.

High dimensional association detection in large-scale genomic data

(Submitter supplied) Joint analyses of genomic datasets obtained in multiple different conditions are essential for understanding the biological mechanism that drives tissue-specificity and cell differentiation, but they still remain computationally challenging. To address this we introduce CLIMB (Composite LIkelihood eMpirical Bayes), a statistical methodology that learns patterns of condition-specificity present in genomic data. more...
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis
Platform:
GPL19057
8 Samples
Download data: BED, BW, TXT
Series
Accession:
GSE156074
ID:
200156074
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

CTCF CFUE

Organism:
Mus musculus
Source name:
CFUE cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4722001
ID:
304722001
4.

CTCF CFUMk

Organism:
Mus musculus
Source name:
CFUMk cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4722000
ID:
304722000
5.

CTCF MEP

Organism:
Mus musculus
Source name:
MEP cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721999
ID:
304721999
6.

CTCF GMP

Organism:
Mus musculus
Source name:
GMP cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721998
ID:
304721998
7.

CTCF CMP

Organism:
Mus musculus
Source name:
CMP cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721997
ID:
304721997
8.

CTCF iMk

Organism:
Mus musculus
Source name:
iMk cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721996
ID:
304721996
9.

CTCF LSK

Organism:
Mus musculus
Source name:
LSK cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721995
ID:
304721995
10.

CTCF G1E

Organism:
Mus musculus
Source name:
G1E cells
Platform:
GPL19057
Series:
GSE156074
Download data: BW
Sample
Accession:
GSM4721994
ID:
304721994
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Supplemental Content

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