GSE158485[Accession] - GEO DataSets - NCBI

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A discrete subset of epigenetically primed human NK cells mediates antigen-specific immune responses

(Submitter supplied) Adaptive features of natural killer (NK) cells have been reported in various species with different underlying mechanisms. It is unclear, however, which NK cell populations are capable of mounting antigen-specific recall responses, and how such functions are regulated at the molecular level. Here we identify and characterize a discrete population of CD49a+CD16- NK cells in the human liver that display increased epigenetic potential to elicit memory responses and has the functional properties to exert antigen-specific immunity on the skin as an effector site. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL21290
47 Samples

Download data: BED, TAR, TXT

Series

Accession:: GSE158485

ID:: 200158485

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000212902.

Illumina HiSeq 3000 (Homo sapiens)

Organism:: Homo sapiens

1138 Series
28241 Samples

Platform

Accession:: GPL21290

ID:: 100021290

Select item 3048182453.

MF301_Liver_CD45_P_L44_RNA_transcriptome

Organism:: Homo sapiens

Source name:: CD45+ cells

Platform:: GPL21290
Series:: GSE158485

Download data: TAR

Sample

Accession:: GSM4818245

ID:: 304818245

SRA Run Selector

Select item 3048182444.

MF301_Liver_CD45_P_L17_RNA_transcriptome

Organism:: Homo sapiens

Source name:: CD45+ cells

Platform:: GPL21290
Series:: GSE158485

Download data: TAR

Sample

Accession:: GSM4818244

ID:: 304818244

SRA Run Selector

Select item 3048182435.

MF301_Liver_CD45_P_L16_RNA_transcriptome

Organism:: Homo sapiens

Source name:: CD45+ cells

Platform:: GPL21290
Series:: GSE158485

Download data: TAR

Sample

Accession:: GSM4818243

ID:: 304818243

SRA Run Selector

Select item 3048015966.

ATAC-Seq LIver41_CD49a_neg_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801596

ID:: 304801596

SRA Run Selector

Select item 3048015957.

ATAC-Seq LIver41_CD49a_pos_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801595

ID:: 304801595

SRA Run Selector

Select item 3048015948.

ATAC-Seq LIver40_CD49a_pos_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801594

ID:: 304801594

SRA Run Selector

Select item 3048015939.

ATAC-Seq LIver40_CD49a_neg_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801593

ID:: 304801593

SRA Run Selector

Select item 30480159210.

ATAC-Seq LIver39_CD49a_pos_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801592

ID:: 304801592

SRA Run Selector

Select item 30480159111.

ATAC-Seq LIver39_CD49a_neg_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801591

ID:: 304801591

SRA Run Selector

Select item 30480159012.

ATAC-Seq LIver41_CD49a_pos_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801590

ID:: 304801590

SRA Run Selector

Select item 30480158913.

ATAC-Seq LIver41_CD49a_neg_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801589

ID:: 304801589

SRA Run Selector

Select item 30480158814.

ATAC-Seq LIver40_CD49a_pos_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801588

ID:: 304801588

SRA Run Selector

Select item 30480158715.

ATAC-Seq LIver40_CD49a_neg_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801587

ID:: 304801587

SRA Run Selector

Select item 30480158616.

ATAC-Seq LIver39_CD49a_pos_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801586

ID:: 304801586

SRA Run Selector

Select item 30480158517.

ATAC-Seq LIver39_CD49a_neg_unstim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Download data: BED

Sample

Accession:: GSM4801585

ID:: 304801585

SRA Run Selector

Select item 30480158418.

RNA-Seq LIver41_CD49a_neg_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Sample

Accession:: GSM4801584

ID:: 304801584

SRA Run Selector

Select item 30480158319.

RNA-Seq LIver41_CD49a_pos_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Sample

Accession:: GSM4801583

ID:: 304801583

SRA Run Selector

Select item 30480158220.

RNA-Seq LIver40_CD49a_pos_stim

Organism:: Homo sapiens

Source name:: NK cells

Platform:: GPL21290
Series:: GSE158485

Sample

Accession:: GSM4801582

ID:: 304801582

SRA Run Selector

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GSE158485[Accession] (49)
GEO DataSets
Oncorhynchus mykiss isolate Arlee chromosome 26, USDA_OmykA_1.1, whole genome sh...
Oncorhynchus mykiss isolate Arlee chromosome 26, USDA_OmykA_1.1, whole genome shotgun sequence
gi|1913591430|gnl|ASM:GCF_013265815 26|ref|NC_048590.1||gpp|GPC_000008297.1||gnl|NCBI_GENOMES|94197

Nucleotide
Sample from Syntrophotalea carbinolica DSM 2380
Sample from Syntrophotalea carbinolica DSM 2380

biosample
Phytophthora cactorum strain PC13-15 contig_662, whole genome shotgun sequence
Phytophthora cactorum strain PC13-15 contig_662, whole genome shotgun sequence
gi|1983200392|gb|RCMP01000662.1||gn :RCMP01|contig_662

Nucleotide
Phytophthora cactorum strain PC13-15 contig_668, whole genome shotgun sequence
Phytophthora cactorum strain PC13-15 contig_668, whole genome shotgun sequence
gi|1983200286|gb|RCMP01000668.1||gn :RCMP01|contig_668

Nucleotide

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