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Items: 7

1.

RNA-Seq and Electrical Penetration Graph Revealed the Role of Grh1-Mediated Activation of Defense Mechanisms towards Green Rice Leafhopper (Nephotettix cincticeps Uhler) Resistance in Rice (Oryza sativa L.)

(Submitter supplied) Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to investigate NGS-derived rice leaf transcriptome profiling (RNA-seq) exposed to green rice leafhopper (GRH) and validated RNA-Seq results using quantitative reverse transcription polymerase chain reaction (qRT–PCR). Methods: Rice leaf mRNA profiles of 21-day-old wild-type (WT) and Near Isogenic Line (NIL) rice were generated by deep sequencing, in triplicate, using Illumina’s HiSeq™ 4000 Sequencing System. more...
Organism:
Oryza sativa Japonica Group; Oryza sativa
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL21812 GPL23013
4 Samples
Download data: GTF, TAB, TXT, XLS
Series
Accession:
GSE176497
ID:
200176497

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 4000 (Oryza sativa)

Organism:
Oryza sativa
50 Series
575 Samples
Download data
Platform
Accession:
GPL23013
ID:
100023013

3.

Illumina HiSeq 4000 (Oryza sativa Japonica Group)

Organism:
Oryza sativa Japonica Group
12 Series
158 Samples
Download data
Platform
Accession:
GPL21812
ID:
100021812

4.

Rice Near Isogenic Line GRH

Organism:
Oryza sativa
Source name:
Leaf
Platform:
GPL23013
Series:
GSE176497
Download data: GTF, TAB
Sample
Accession:
GSM5366640
ID:
305366640

SRA Run Selector

5.

Rice Near Isogenic Line control

Organism:
Oryza sativa
Source name:
Leaf
Platform:
GPL23013
Series:
GSE176497
Download data: GTF, TAB
Sample
Accession:
GSM5366639
ID:
305366639

SRA Run Selector

6.

Rice Ilpum GRH

Organism:
Oryza sativa Japonica Group
Source name:
Leaf
Platform:
GPL21812
Series:
GSE176497
Download data: GTF, TAB
Sample
Accession:
GSM5366638
ID:
305366638

SRA Run Selector

7.

Rice Ilpum control

Organism:
Oryza sativa Japonica Group
Source name:
Leaf
Platform:
GPL21812
Series:
GSE176497
Download data: GTF, TAB
Sample
Accession:
GSM5366637
ID:
305366637

SRA Run Selector

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db=gds|term=GSE176497[Accession]|query=1|qty=3|blobid=MCID_6650c1a7d01e38019cbc41e6|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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