GSE196860[Accession] - GEO DataSets - NCBI

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Select item 2001968601.

MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer

(Submitter supplied) The BRCA1-associated protein 1 (BAP1) is a ubiquitin carboxy-terminal hydrolase (UCH), which forms a multi-protein complex with different epigenetic factors such as ASXL1-3, and FOXK1/2. At chromatin, BAP1 catalyzes the removal of mono-ubiquitination on histone H2AK119 in collaboration with other subunits within the complex, and therefore functions as a transcriptional activator. However, the crosstalk between different subunits and how these subunits impact BAP1 function remains unclear. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL24676
72 Samples

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Series

Accession:: GSE196860

ID:: 200196860

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000246762.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

16622 Series
924035 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 3064242293.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6424229

ID:: 306424229

SRA Run Selector

Select item 3064242284.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6424228

ID:: 306424228

SRA Run Selector

Select item 3064242275.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

Download data: BW

Sample

Accession:: GSM6424227

ID:: 306424227

SRA Run Selector

Select item 3064227806.

293T_ASXLKO_MBD6

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422780

ID:: 306422780

SRA Run Selector

Select item 3064227797.

293T_ASXLWT_MBD6

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422779

ID:: 306422779

SRA Run Selector

Select item 3064227788.

293T_ASXLKO_MBD5

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422778

ID:: 306422778

SRA Run Selector

Select item 3064227779.

293T_ASXLWT_MBD5

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422777

ID:: 306422777

SRA Run Selector

Select item 30642277610.

293T_ASXLKO_BAP1

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422776

ID:: 306422776

SRA Run Selector

Select item 30642277511.

293T_ASXLWT_BAP1

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM6422775

ID:: 306422775

SRA Run Selector

Select item 30642277412.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

Download data: BW

Sample

Accession:: GSM6422774

ID:: 306422774

SRA Run Selector

Select item 30590328913.

293T_MBD6KO_Rep2

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM5903289

ID:: 305903289

SRA Run Selector

Select item 30590328814.

293T_MBD6KO_Rep1

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM5903288

ID:: 305903288

SRA Run Selector

Select item 30590328715.

293T_MBD5KO_Rep2

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM5903287

ID:: 305903287

SRA Run Selector

Select item 30590328616.

293T_MBD5KO_Rep1

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM5903286

ID:: 305903286

SRA Run Selector

Select item 30590328517.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

Download data: BW

Sample

Accession:: GSM5903285

ID:: 305903285

SRA Run Selector

Select item 30590328418.

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE196860

Download data: BW

Sample

Accession:: GSM5903284

ID:: 305903284

SRA Run Selector

Select item 30590328319.

H1963_sgBAP1_2_Rep2

Organism:: Homo sapiens

Source name:: NCI-H1963

Platform:: GPL24676
Series:: GSE196860

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Sample

Accession:: GSM5903283

ID:: 305903283

SRA Run Selector

Select item 30590328220.

H1963_sgBAP1_2_Rep1

Organism:: Homo sapiens

Source name:: NCI-H1963

Platform:: GPL24676
Series:: GSE196860

Download data: BW

Sample

Accession:: GSM5903282

ID:: 305903282

SRA Run Selector

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