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Items: 10

1.

MLL-AF4 cooperates with PAF1 and FACT to drive high density enhancer interactions in leukemia [ChIP-seq]

(Submitter supplied) Aberrant enhancer activation is a key mechanism driving oncogene expression in many cancers. While much is known about the regulation of larger chromosome domains in eukaryotes, the details of enhancer-promoter interactions remain poorly understood. Recent work suggests co-activators like BRD4 and Mediator have little impact on enhancer-promoter interactions. In leukemias controlled by the MLL-AF4 fusion protein, we use the ultra-high resolution technique Micro-Capture-C (MCC) to show that MLL-AF4 binding promotes broad, high-density regions of enhancer-promoter interactions at a subset of key targets. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18573
8 Samples
Download data: BIGWIG
Series
Accession:
GSE202449
ID:
200202449
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

MLL ChIP seq for iALL patient sample 2

Organism:
Homo sapiens
Source name:
MLL-AF4 infant ALL patient 2 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122657
ID:
306122657
4.

ChIP seq Input for iALL patient sample 2

Organism:
Homo sapiens
Source name:
MLL-AF4 infant ALL patient 2 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122656
ID:
306122656
5.

AF4 ChIP seq for chALL patient sample 3

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 3 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122655
ID:
306122655
6.

MLL ChIP seq for chALL patient sample 3

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 3 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122654
ID:
306122654
7.

ChIP seq Input for chALL patient sample 3

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 3 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122653
ID:
306122653
8.

AF4 ChIP seq for chALL patient sample 1

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 1 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122652
ID:
306122652
9.

MLL ChIP seq for chALL patient sample 1

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 1 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122651
ID:
306122651
10.

ChIP seq Input for chALL patient sample 1

Organism:
Homo sapiens
Source name:
MLL-AF4 childhood ALL patient 1 blasts
Platform:
GPL18573
Series:
GSE202449 GSE202451
Download data: BIGWIG
Sample
Accession:
GSM6122650
ID:
306122650
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Supplemental Content

db=gds|term=GSE202449[Accession]|query=21|qty=2|blobid=MCID_671fab29e158b40557c73b80|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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