GSE204980[Accession] - GEO DataSets - NCBI

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Select item 2002049801.

Exclusion of m6A from splice-site-proximal regions by the exon-junction complex dictates m6A topologies and mRNA stability

(Submitter supplied) N6-methyladenosine (m6A), a widespread destabilizing mark on mRNA, is non-uniformly distributed across the transcriptome, yet the basis for its selective deposition is unknown. Here, we uncover that m6A deposition is not selective. Instead, m6A distribution is exclusion-based: m6A-consensus harboring sites are methylated by default, unless they are within a window of up to ~200 nt from an exon-intron junction. more...

Organism:: Homo sapiens; Mus musculus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24676 GPL24247
250 Samples

Download data: BED, CSV, RDATA, RDS, XLSX

Series

Accession:: GSE204980

ID:: 200204980

PubMed Full text in PMC Similar studies

Select item 1000246762.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

14305 Series
873861 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 1000242473.

Illumina NovaSeq 6000 (Mus musculus)

Organism:: Mus musculus

11700 Series
653860 Samples

Platform

Accession:: GPL24247

ID:: 100024247

Select item 3066015834.

IP_rep2_WTdeg_8h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601583

ID:: 306601583

SRA Run Selector

Select item 3066015825.

IP_rep2_WTdeg_4h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601582

ID:: 306601582

SRA Run Selector

Select item 3066015816.

IP_rep2_WTdeg_24h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601581

ID:: 306601581

SRA Run Selector

Select item 3066015807.

IP_rep2_WTdeg_16h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601580

ID:: 306601580

SRA Run Selector

Select item 3066015798.

IP_rep2_WTdeg_0h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601579

ID:: 306601579

SRA Run Selector

Select item 3066015789.

IP_rep2_Y14deg_8h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601578

ID:: 306601578

SRA Run Selector

Select item 30660157710.

IP_rep2_Y14deg_4h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601577

ID:: 306601577

SRA Run Selector

Select item 30660157611.

IP_rep2_Y14deg_24h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601576

ID:: 306601576

SRA Run Selector

Select item 30660157512.

IP_rep2_Y14deg_16h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601575

ID:: 306601575

SRA Run Selector

Select item 30660157413.

IP_rep2_Y14deg_0h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601574

ID:: 306601574

SRA Run Selector

Select item 30660157314.

IP_rep1_WTdeg_8h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601573

ID:: 306601573

SRA Run Selector

Select item 30660157215.

IP_rep1_WTdeg_4h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601572

ID:: 306601572

SRA Run Selector

Select item 30660157116.

IP_rep1_WTdeg_24h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601571

ID:: 306601571

SRA Run Selector

Select item 30660157017.

IP_rep1_WTdeg_16h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601570

ID:: 306601570

SRA Run Selector

Select item 30660156918.

IP_rep1_WTdeg_0h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601569

ID:: 306601569

SRA Run Selector

Select item 30660156819.

IP_rep1_Y14deg_8h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601568

ID:: 306601568

SRA Run Selector

Select item 30660156720.

IP_rep1_Y14deg_4h

Organism:: Homo sapiens

Source name:: HEK293T

Platform:: GPL24676
Series:: GSE204980

Download data: RDATA

Sample

Accession:: GSM6601567

ID:: 306601567

SRA Run Selector

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