GSE226498[Accession] - GEO DataSets - NCBI

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Select item 2002264981.

Epigenetic evolution of the Ly49 gene family [ATAC-Seq]

(Submitter supplied) Comparative genomics has revealed the rapid lineage-specific expansion of multiple gene families involved in immunity, presumably due to the complexity of ensuring pathogen defense while maintaining self-tolerance. Paralogs within these gene families often evolved distinct roles in immunity. However, less is known about how the epigenome and cis-regulation of these gene families evolved. Here we focus on the epigenetic evolution of the rapidly evolving murine Ly49 gene family. more...

Organism:: Rattus norvegicus; Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL19057 GPL20084
27 Samples

Download data: BW

Series

Accession:: GSE226498

ID:: 200226498

PubMed Full text in PMC Similar studies

Select item 1000200842.

Illumina NextSeq 500 (Rattus norvegicus)

Organism:: Rattus norvegicus

316 Series
6494 Samples

Platform

Accession:: GPL20084

ID:: 100020084

Select item 1000190573.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10274 Series
295674 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 3080839404.

B6_Spleen_NK_Ly49C_or_Ly49I_pos_rep2_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083940

ID:: 308083940

SRA Run Selector

Select item 3080839395.

B6_Spleen_NK_Ly49C_or_Ly49I_pos_rep1_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083939

ID:: 308083939

SRA Run Selector

Select item 3080839386.

B6_Spleen_NK_Ly49C_and_Ly49I_neg_rep2_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083938

ID:: 308083938

SRA Run Selector

Select item 3080839377.

B6_Spleen_NK_Ly49C_and_Ly49I_neg_rep1_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083937

ID:: 308083937

SRA Run Selector

Select item 3080839368.

B6_Spleen_CD8Treg_rep3_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083936

ID:: 308083936

SRA Run Selector

Select item 3080839359.

B6_Spleen_CD8Treg_rep2_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083935

ID:: 308083935

SRA Run Selector

Select item 30808393410.

B6_Spleen_CD8Treg_rep1_ATAC

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM8083934

ID:: 308083934

SRA Run Selector

Select item 30707800111.

NOD_NK_ATAC_rep2

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7078001

ID:: 307078001

SRA Run Selector

Select item 30707800012.

NOD_NK_ATAC_rep1

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7078000

ID:: 307078000

SRA Run Selector

Select item 30707799913.

129_NK_ATAC_rep2

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077999

ID:: 307077999

SRA Run Selector

Select item 30707799814.

129_NK_ATAC_rep1

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077998

ID:: 307077998

SRA Run Selector

Select item 30707799715.

B6_Ly49Dp_ATAC_rep3

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077997

ID:: 307077997

SRA Run Selector

Select item 30707799616.

B6_Ly49Dp_ATAC_rep2

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077996

ID:: 307077996

SRA Run Selector

Select item 30707799517.

B6_Ly49Dp_ATAC_rep1

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077995

ID:: 307077995

SRA Run Selector

Select item 30707799418.

B6_Ly49Dn_ATAC_rep3

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077994

ID:: 307077994

SRA Run Selector

Select item 30707799319.

B6_Ly49Dn_ATAC_rep2

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077993

ID:: 307077993

SRA Run Selector

Select item 30707799220.

B6_Ly49Dn_ATAC_rep1

Organism:: Mus musculus

Source name:: Spleen

Platform:: GPL19057
Series:: GSE226498 GSE226502

Download data: BW

Sample

Accession:: GSM7077992

ID:: 307077992

SRA Run Selector

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GSE226498[Accession] (30)
GEO DataSets
Caenorhabditis elegans LIPaSe related (lips-9), mRNA
Caenorhabditis elegans LIPaSe related (lips-9), mRNA
gi|1972256216|ref|NM_064355.5|

Nucleotide
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Pyropia collinsii]
gi|340747698|gb|AEK66699.1|

Protein
Saccharomyces cerevisiae S288C uncharacterized protein (YNR065C), partial mRNA
Saccharomyces cerevisiae S288C uncharacterized protein (YNR065C), partial mRNA
gi|296147827|ref|NM_001183242.1|

Nucleotide
Rattus norvegicus similar to C530044N13Rik protein, mRNA (cDNA clone MGC:94195 I...
Rattus norvegicus similar to C530044N13Rik protein, mRNA (cDNA clone MGC:94195 IMAGE:7129542), complete cds
gi|51859192|gb|BC081991.1|

Nucleotide

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