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Items: 14

1.

Multiple direct and indirect roles of the Paf1 Complex in elongation, splicing, and histone post-translational modifications [RNA-seq]

(Submitter supplied) Eukaryotes employ a set of conserved transcription elongation factors to modulate the behavior of RNA polymerase II (RNAPII). Disruptions of one such factor, the Paf1 complex (Paf1C), generate subunit-specific phenotypes, including distinct changes to co-transcriptional histone modifications. How individual Paf1C subunits impact transcription and coupled processes remains ambiguous. By comparing conditional depletion and steady-state deletion of Paf1C subunits, we determine direct and indirect contributions of Paf1C to gene expression in Saccharomyces cerevisiae. more...
Organism:
Saccharomyces cerevisiae; Schizosaccharomyces pombe
Type:
Expression profiling by high throughput sequencing
Platform:
GPL28173
12 Samples
Download data: BW
Series
Accession:
GSE255362
ID:
200255362

PubMed Full text in PMC Similar studies

2.

Illumina NextSeq 500 (Saccharomyces cerevisiae; Schizosaccharomyces pombe)

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
3 Series
110 Samples
Download data
Platform
Accession:
GPL28173
ID:
100028173

3.

Wt, Total, Rep2, Paf1CD

Organism:
Saccharomyces cerevisiae; Schizosaccharomyces pombe
Source name:
MATa his4-912δ lys2-128δ leu2Δ1 trp1Δ63
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070532
ID:
308070532

SRA Run Selector

4.

Wt, Total, Rep1, Paf1CD

Organism:
Saccharomyces cerevisiae; Schizosaccharomyces pombe
Source name:
MATa his4-912δ lys2-128δ leu2Δ1 trp1Δ63
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070531
ID:
308070531

SRA Run Selector

5.

rtf1D, Total, Rep2, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATα his4-912δ lys2-128δ leu2Δ1 trp1Δ63 rtf1Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070530
ID:
308070530

SRA Run Selector

6.

rtf1D, Total, Rep1, Paf1CD

Organism:
Saccharomyces cerevisiae; Schizosaccharomyces pombe
Source name:
MATα his4-912δ lys2-128δ leu2Δ1 trp1Δ63 rtf1Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070529
ID:
308070529

SRA Run Selector

7.

paf1D, Total, Rep2, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATα his4-912δ lys2-128δ leu2Δ1 trp1Δ63 paf1Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070528
ID:
308070528

SRA Run Selector

8.

paf1D, Total, Rep1, Paf1CD

Organism:
Saccharomyces cerevisiae; Schizosaccharomyces pombe
Source name:
MATα his4-912δ lys2-128δ leu2Δ1 trp1Δ63 paf1Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070527
ID:
308070527

SRA Run Selector

9.

leo1D, Total, Rep2, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATa his4-912δ lys2-128δ ura3-52 trp1Δ63 leo1Δ::KanMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070526
ID:
308070526

SRA Run Selector

10.

leo1D, Total, Rep1, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATa his4-912δ lys2-128δ ura3-52 trp1Δ63 leo1Δ::KanMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070525
ID:
308070525

SRA Run Selector

11.

ctr9D, Total, Rep2, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATα his4-912δ lys2-128δ trp1Δ63 ctr9Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070524
ID:
308070524

SRA Run Selector

12.

ctr9D, Total, Rep1, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATα his4-912δ lys2-128δ trp1Δ63 ctr9Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070523
ID:
308070523

SRA Run Selector

13.

cdc73D, Total, Rep2, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATa his4-912δ lys2-128δ trp1Δ63 cdc73Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070522
ID:
308070522

SRA Run Selector

14.

cdc73D, Total, Rep1, Paf1CD

Organism:
Schizosaccharomyces pombe; Saccharomyces cerevisiae
Source name:
MATa his4-912δ lys2-128δ trp1Δ63 cdc73Δ::KANMX
Platform:
GPL28173
Series:
GSE255362
Download data: BW
Sample
Accession:
GSM8070521
ID:
308070521

SRA Run Selector

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db=gds|term=GSE255362[Accession]|query=5|qty=3|blobid=MCID_67169bf9d1cc6623eb2bb073|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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