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Items: 8

1.

Neoantigen identification for 1956 and F244 murine MCA-sarcomas

(Submitter supplied) This study was to predict neoantigens in 1956 and F244 murine MCA-sarcomas (female C57BL/6N and male 129S6 lines, respectively). Mutations were called by comparing tumor versus normal whole exome sequencing (WES) data, and filtered for expressing mutations using RNA-seq data. Out of expressing mutations, MHC class I or II neoantigens were predicted and screened by T cell reactivities (IFN-gamma ELISPOT and tetramer staining). more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL24247
6 Samples
Download data: VCF, XLSX
Series
Accession:
GSE267886
ID:
200267886

PubMed Similar studies

2.

Illumina NovaSeq 6000 (Mus musculus)

Organism:
Mus musculus
12452 Series
669671 Samples
Download data
Platform
Accession:
GPL24247
ID:
100024247

3.

RNA, 1956

Organism:
Mus musculus
Source name:
In vitro cultured cells
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281102
ID:
308281102

SRA Run Selector

4.

RNA, F244

Organism:
Mus musculus
Source name:
In vitro cultured cells
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281101
ID:
308281101

SRA Run Selector

5.

DNA, Control for 1956

Organism:
Mus musculus
Source name:
tail
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281100
ID:
308281100

SRA Run Selector

6.

DNA, Control for F244

Organism:
Mus musculus
Source name:
tail
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281099
ID:
308281099

SRA Run Selector

7.

DNA, 1956 cells

Organism:
Mus musculus
Source name:
In vitro cultured cells
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281098
ID:
308281098

SRA Run Selector

8.

DNA, F244 cells

Organism:
Mus musculus
Source name:
In vitro cultured cells
Platform:
GPL24247
Series:
GSE267886
Download data
Sample
Accession:
GSM8281097
ID:
308281097

SRA Run Selector

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db=gds|term=GSE267886[Accession]|query=1|qty=2|blobid=MCID_6684087b8f3295570aa1c844|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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