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Items: 7

1.

SMC-mediated dosage compensation in C. elegans evolved in the presence of an ancestral nematode mechanism [Hi-C]

(Submitter supplied) Mechanisms of X chromosome dosage compensation have been studied extensively in a few model species representing clades of shared sex chromosome ancestry. However, the diversity within each clade as a function of sex chromosome evolution is largely unknown. Here, we anchor ourselves to the nematode Caenorhabditis elegans, for which a well-studied mechanism of dosage compensation occurs through a specialized structural maintenance of chromosomes (SMC) complex, and explore the diversity of dosage compensation in the surrounding phylogeny of nematodes. more...
Organism:
Pristionchus pacificus; Oscheius tipulae
Type:
Other
Platforms:
GPL32681 GPL34494
4 Samples
Download data: HIC
Series
Accession:
GSE267963
ID:
200267963

2.

Illumina NovaSeq 6000 (Pristionchus pacificus)

Organism:
Pristionchus pacificus
1 Series
2 Samples
Download data
Platform
Accession:
GPL34494
ID:
100034494

3.

Illumina NovaSeq 6000 (Oscheius tipulae)

Organism:
Oscheius tipulae
5 Series
69 Samples
Download data
Platform
Accession:
GPL32681
ID:
100032681

4.

HiC, CEW1, early stage synchronized larvae, rep 2

Organism:
Oscheius tipulae
Source name:
CEW1
Platform:
GPL32681
Series:
GSE267963
Download data: HIC
Sample
Accession:
GSM8282556
ID:
308282556

SRA Run Selector

5.

HiC, CEW1, early stage synchronized larvae, rep 1

Organism:
Oscheius tipulae
Source name:
CEW1
Platform:
GPL32681
Series:
GSE267963
Download data: HIC
Sample
Accession:
GSM8282555
ID:
308282555

SRA Run Selector

6.

HiC, PS312, J2, rep2

Organism:
Pristionchus pacificus
Source name:
PS312
Platform:
GPL34494
Series:
GSE267963
Download data: HIC
Sample
Accession:
GSM8282558
ID:
308282558

SRA Run Selector

7.

HiC, PS312, J2, rep1

Organism:
Pristionchus pacificus
Source name:
PS312
Platform:
GPL34494
Series:
GSE267963
Download data: HIC
Sample
Accession:
GSM8282557
ID:
308282557

SRA Run Selector

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db=gds|term=GSE267963[Accession]|query=1|qty=3|blobid=MCID_672495c0bcee590f973bf6ff|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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