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Select item 2002691161.

Notch induces transcription by stimulating release of paused RNA Pol II without increasing chromatin accessibility [TT-seq]

(Submitter supplied) Notch proteins undergo ligand-induced proteolysis to release a nuclear effector that influences a wide range of cell fate decisions by regulating gene activity. However, despite years of study, how Notch induces the transcription of its target genes remains unclear. Here, we comprehensively examined the response to human Notch1 across a time course of activation, using genomic assays of nascent RNA and chromatin accessibility. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Other

Platform:: GPL24676
20 Samples

Download data: BW, XLSX

Series

Accession:: GSE269116

ID:: 200269116

Analyze with GEO2R

Select item 1000246762.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

17080 Series
933677 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 3083065923.

TT_4h_washout_DMSO_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306592

ID:: 308306592

SRA Run Selector

Select item 3083065914.

TT_4h_washout_DMSO_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306591

ID:: 308306591

SRA Run Selector

Select item 3083065905.

TT_4h_washout_BRM014_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306590

ID:: 308306590

SRA Run Selector

Select item 3083065896.

TT_4h_washout_BRM014_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306589

ID:: 308306589

SRA Run Selector

Select item 3083065887.

TT_4h_GSI_DMSO_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306588

ID:: 308306588

SRA Run Selector

Select item 3083065878.

TT_4h_GSI_DMSO_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306587

ID:: 308306587

SRA Run Selector

Select item 3083065869.

TT_4h_GSI_BRM014_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306586

ID:: 308306586

SRA Run Selector

Select item 30830658510.

TT_4h_GSI_BRM014_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306585

ID:: 308306585

SRA Run Selector

Select item 30830658411.

TT_1h_washout_DMSO_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306584

ID:: 308306584

SRA Run Selector

Select item 30830658312.

TT_1h_washout_DMSO_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306583

ID:: 308306583

SRA Run Selector

Select item 30830658213.

TT_1h_washout_BRM014_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306582

ID:: 308306582

SRA Run Selector

Select item 30830658114.

TT_1h_washout_BRM014_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306581

ID:: 308306581

SRA Run Selector

Select item 30830658015.

TT_1h_GSI_DMSO_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306580

ID:: 308306580

SRA Run Selector

Select item 30830657916.

TT_1h_GSI_DMSO_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306579

ID:: 308306579

SRA Run Selector

Select item 30830657817.

TT_1h_GSI_BRM014_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306578

ID:: 308306578

SRA Run Selector

Select item 30830657718.

TT_1h_GSI_BRM014_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306577

ID:: 308306577

SRA Run Selector

Select item 30830657619.

TT_0h_GSI_DMSO_rep2

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Sample

Accession:: GSM8306576

ID:: 308306576

SRA Run Selector

Select item 30830657520.

TT_0h_GSI_DMSO_rep1

Organism:: Homo sapiens

Source name:: SC2

Platform:: GPL24676
Series:: GSE269116 GSE269128

Download data: BW

Sample

Accession:: GSM8306575

ID:: 308306575

SRA Run Selector

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GSE269116[Accession] (22)
GEO DataSets
ox60f11.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1660749 3' similar to ...
ox60f11.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1660749 3' similar to SW:CRP2_RAT P36201 CYSTEINE-RICH PROTEIN 2, mRNA sequence
gi|3281403|gnl|dbEST|1781544|gb|AI0 .1|

Nucleotide
Homo sapiens cDNA clone IMAGE:4755315, partial cds
Homo sapiens cDNA clone IMAGE:4755315, partial cds
gi|39645895|gb|BC063545.1|

Nucleotide
Bacillus safensis strain B-14229 B-14229_S272_genome_contig_0000006, whole genom...
Bacillus safensis strain B-14229 B-14229_S272_genome_contig_0000006, whole genome shotgun sequence
gi|2662654530|ref|NZ_JARMCG01000000 gnl|WGS:NZ_JARMCG01|B-14229_S272_genome_contig_0000006

Nucleotide
1539[uid] (1)
Taxonomy

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