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Items: 20

1.

Methylation Changes During Soybean Seed Development

(Submitter supplied) What methylation changes are occurring during seed development largely remains unknown. To uncover the possible role of DNA methylation throughout all of seed development - from fertilization through dormancy and post-germination in soybean, we characterized the methylome of whole seeds representing the differentiation (GLOB and COT stages), maturation (early- [EM], mid- [B1] and late- [AA1] maturation stages), dormancy (DRY stage), and post-germination (seedling) phases of soybean seed development using Illumina sequencing. more...
Organism:
Glycine max
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL15008
18 Samples
Download data: TXT
Series
Accession:
GSE34637
ID:
200034637

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Glycine max)

Organism:
Glycine max
79 Series
1702 Samples
Download data
Platform
Accession:
GPL15008
ID:
100015008

3.

Mid-maturation stage whole seed biological replicate 2

Organism:
Glycine max
Source name:
Soybean seeds containing mid-maturation (MM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM2417603
ID:
302417603

SRA Run Selector

4.

Mid-maturation stage whole seed biological replicate 1

Organism:
Glycine max
Source name:
Soybean seeds containing mid-maturation (MM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM2417602
ID:
302417602

SRA Run Selector

5.

Cotyledon of seedling biological replicate 3

Organism:
Glycine max
Source name:
Soybean cotyledons of Seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707342
ID:
301707342

SRA Run Selector

6.

Cotyledon of seedling biological replicate 2

Organism:
Glycine max
Source name:
Soybean cotyledons of Seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707341
ID:
301707341

SRA Run Selector

7.

Seedling biological replicate 3

Organism:
Glycine max
Source name:
Soybean seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707340
ID:
301707340

SRA Run Selector

8.

Seedling biological replicate 2

Organism:
Glycine max
Source name:
Soybean seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707339
ID:
301707339

SRA Run Selector

9.

Late-maturation stage whole seed biological replicate 3

Organism:
Glycine max
Source name:
Soybean seeds containing late-maturation (LM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707338
ID:
301707338

SRA Run Selector

10.

Late-maturation stage whole seed biological replicate 2

Organism:
Glycine max
Source name:
Soybean seeds containing late-maturation (LM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707337
ID:
301707337

SRA Run Selector

11.

Pre-dormancy stage 1 whole seed

Organism:
Glycine max
Source name:
Soybean seeds containing cotyledon (COT) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707336
ID:
301707336

SRA Run Selector

12.

Pre-dormancy stage 2 whole seed

Organism:
Glycine max
Source name:
Soybean seeds containing early maturation (EM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707335
ID:
301707335

SRA Run Selector

13.

Dry seed biological replicate 2

Organism:
Glycine max
Source name:
Dry soybean seeds
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1707334
ID:
301707334

SRA Run Selector

14.

Cotyledon stage whole seed

Organism:
Glycine max
Source name:
Soybean seeds containing cotyledon (COT) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1392187
ID:
301392187

SRA Run Selector

15.

Cotyledon of seedling biological replicate 1

Organism:
Glycine max
Source name:
Soybean cotyledons of Seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1008197
ID:
301008197

SRA Run Selector

16.

Seedling biological replicate 1

Organism:
Glycine max
Source name:
Soybean seedling six days after imbibition
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM1008196
ID:
301008196

SRA Run Selector

17.

Dry seed Biological replicate 1

Organism:
Glycine max
Source name:
Dry soybean seeds
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM852279
ID:
300852279

SRA Run Selector

18.

Late-maturation stage whole seed biological replicate 1

Organism:
Glycine max
Source name:
Soybean seeds containing late-maturation (AA1) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM852278
ID:
300852278

SRA Run Selector

19.

Early-maturation stage whole seed

Organism:
Glycine max
Source name:
Soybean seeds containing early maturation (EM) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM852275
ID:
300852275

SRA Run Selector

20.

Globular stage whole seed

Organism:
Glycine max
Source name:
Soybean seeds containing globular (GLOB) stage embryos
Platform:
GPL15008
Series:
GSE34637
Download data: TXT
Sample
Accession:
GSM852274
ID:
300852274

SRA Run Selector

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