GSE40081[Accession] - GEO DataSets - NCBI

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Items: 5

Select item 2000400811.

sRNA profiling during Oxytricha conjugation

(Submitter supplied) In Oxytricha, the somatic genome is responsible for vegetative growth, while the germline contributes DNA to the next sexual generation. Somatic nuclear development eliminates all transposons and other so-called "junk DNA", which constitute ~95% of the germline. We demonstrate that Piwi-interacting small RNAs (piRNAs) from the maternal nucleus can specify genomic regions for retention in this process. more...

Organism:: Oxytricha trifallax

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL15459 GPL15927
2 Samples

Download data: FA, TXT

Series

Accession:: GSE40081

ID:: 200040081

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000159272.

Illumina Genome Analyzer IIx (Oxytricha trifallax)

Organism:: Oxytricha trifallax

2 Series
2 Samples

Platform

Accession:: GPL15927

ID:: 100015927

Select item 1000154593.

Illumina HiSeq 2000 (Oxytricha trifallax)

Organism:: Oxytricha trifallax

4 Series
32 Samples

Platform

Accession:: GPL15459

ID:: 100015459

Select item 3009847704.

sRNAs from Oxytricha conjugation at 20 hr

Organism:: Oxytricha trifallax

Source name:: Oxytricha mating cells

Platform:: GPL15927
Series:: GSE40081

Download data: FA

Sample

Accession:: GSM984770

ID:: 300984770

SRA Run Selector

Select item 3009847715.

sRNAs from Contig 22226.0 IES1+ strain backcrossed to wild-type strain at 19 hr

Organism:: Oxytricha trifallax

Source name:: Oxytricha mating cells

Platform:: GPL15459
Series:: GSE40081

Download data: FA, TXT

Sample

Accession:: GSM984771

ID:: 300984771

SRA Run Selector

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GSE40081[Accession] (5)
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