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Items: 19

1.

Examination of genome-wide methylation changes in lung cancer cell lines A549 (A) and HTB56 (H) [RRBS-Seq experiments]

(Submitter supplied) Cancer cell phenotypes are partially determined by epigenetic specifications such as DNA methylation. Metastasis development is a late event in cancerogenesis and might be associated with epigenetic alterations. Here, we analyzed genome wide DNA methylation changes that were associated with pro-metastatic phenotypes in non-small cell lung cancer with Reduced Representation Bisulfite Sequencing. DNMT-inhibition by 5-Azacytidine at low concentrations reverted the pro-metastatic phenotype. more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL15456
17 Samples
Download data: TXT
Series
Accession:
GSE52140
ID:
200052140

PubMed Similar studies SRA Run Selector

2.

Illumina HiScanSQ (Homo sapiens)

Organism:
Homo sapiens
122 Series
2006 Samples
Download data
Platform
Accession:
GPL15456
ID:
100015456

3.

H2R_d0

Organism:
Homo sapiens
Source name:
RRBS HTB56 intermediate metastatic cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251242
ID:
301251242

SRA Run Selector

4.

A2R_d0

Organism:
Homo sapiens
Source name:
RRBS A459 intermediate metastatic cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251241
ID:
301251241

SRA Run Selector

5.

A1R_d0

Organism:
Homo sapiens
Source name:
RRBS A459 intermediate metastatic cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251240
ID:
301251240

SRA Run Selector

6.

H3R_d0_rep2

Organism:
Homo sapiens
Source name:
RRBS highly metastatic HTB56 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251239
ID:
301251239

SRA Run Selector

7.

H0R_d0_rep2

Organism:
Homo sapiens
Source name:
RRBS HTB56 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251238
ID:
301251238

SRA Run Selector

8.

A3R_d0_rep2

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A459 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251237
ID:
301251237

SRA Run Selector

9.

A0R_d0_rep2

Organism:
Homo sapiens
Source name:
RRBS A459 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1251236
ID:
301251236

SRA Run Selector

10.

H3R_d13_250

Organism:
Homo sapiens
Source name:
RRBS highly metastatic HTB56 cell line at day 13 after 6 days 5-Azacytidine treatment at 250 nM and 7 days release in normal media.
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084247
ID:
301084247

SRA Run Selector

11.

H3R_d6_250

Organism:
Homo sapiens
Source name:
RRBS highly metastatic HTB56 cell line after 6 days 5-Azacytidine treatment at 250 nM
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084246
ID:
301084246

SRA Run Selector

12.

H3R_d0_rep1

Organism:
Homo sapiens
Source name:
RRBS highly metastatic HTB56 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084245
ID:
301084245

SRA Run Selector

13.

H0R_d0_rep1

Organism:
Homo sapiens
Source name:
RRBS HTB56 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084244
ID:
301084244

SRA Run Selector

14.

A3R_d13_1000

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A549 cell line at day 13 after 6 days 5-Azacytidine treatment at 1000 nM and 7 days release in normal media.
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084243
ID:
301084243

SRA Run Selector

15.

A3R_d13_250

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A549 cell line at day 13 after 6 days 5-Azacytidine treatment at 250 nM and 7 days release in normal media.
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084242
ID:
301084242

SRA Run Selector

16.

A3R_d6_1000

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A459 cell line after 6 days 5-Azacytidine treatment at 1000 nM
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084241
ID:
301084241

SRA Run Selector

17.

A3R_d6_250

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A459 cell line after 6 days 5-Azacytidine treatment at 250 nM
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084240
ID:
301084240

SRA Run Selector

18.

A3R_d0_rep1

Organism:
Homo sapiens
Source name:
RRBS highly metastatic A459 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084239
ID:
301084239

SRA Run Selector

19.

A0R_d0_rep1

Organism:
Homo sapiens
Source name:
RRBS A459 cell line
Platform:
GPL15456
Series:
GSE44390 GSE52140
Download data: TXT
Sample
Accession:
GSM1084238
ID:
301084238

SRA Run Selector

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