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Items: 1 to 20 of 68

1.

The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites

(Submitter supplied) Long noncoding RNAs (lncRNAs) are important regulators of chromatin; however, the mechanistic roles for many lncRNAs are poorly understood in part because their direct interactions with genomic loci and proteins are difficult to assess. We used CHART-seq to map the genomic binding sites for two highly expressed human lncRNAs, NEAT1 and MALAT1, which localize within the nucleus to paraspeckles and nuclear speckles, respectively. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL11154
66 Samples
Download data: BW
Series
Accession:
GSE58444
ID:
200058444
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

MCF7 Input CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, CHART input
Platform:
GPL11154
Series:
GSE58444
Download data
Sample
Accession:
GSM1411272
ID:
301411272
4.

MCF7 MALAT1 Sense CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411271
ID:
301411271
5.

MCF7 MALAT1 CO2 CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411270
ID:
301411270
6.

MCF7 MALAT1 CO1 CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411269
ID:
301411269
7.

MCF7 NEAT1 Sense CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411268
ID:
301411268
8.

MCF7 NEAT1 CO2 CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411267
ID:
301411267
9.

MCF7 NEAT1 CO1 CHART-seq Flavopiridol treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411266
ID:
301411266
10.

MCF7 Input CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, CHART input
Platform:
GPL11154
Series:
GSE58444
Download data
Sample
Accession:
GSM1411265
ID:
301411265
11.

MCF7 MALAT1 Sense CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411264
ID:
301411264
12.

MCF7 MALAT1 CO2 CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411263
ID:
301411263
13.

MCF7 MALAT1 CO1 CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411262
ID:
301411262
14.

MCF7 NEAT1 Sense CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411261
ID:
301411261
15.

MCF7 NEAT1 CO2 CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411260
ID:
301411260
16.

MCF7 NEAT1 CO1 CHART-seq Flavopiridol treatment, rep1

Organism:
Homo sapiens
Source name:
MCF-7, Flavopiridol, NEAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411259
ID:
301411259
17.

MCF7 Input CHART-seq DMSO treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, DMSO vehicle, CHART input
Platform:
GPL11154
Series:
GSE58444
Download data
Sample
Accession:
GSM1411258
ID:
301411258
18.

MCF7 MALAT1 Sense CHART-seq DMSO treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, DMSO vehicle, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411257
ID:
301411257
19.

MCF7 MALAT1 CO2 CHART-seq DMSO treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, DMSO vehicle, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411256
ID:
301411256
20.

MCF7 MALAT1 CO1 CHART-seq DMSO treatment, rep2

Organism:
Homo sapiens
Source name:
MCF-7, DMSO vehicle, MALAT1 CHART
Platform:
GPL11154
Series:
GSE58444
Download data: BW
Sample
Accession:
GSM1411255
ID:
301411255
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Supplemental Content

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