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Items: 1 to 20 of 23

1.

The DREAM complex promotes gene body deposition of H2A.Z for target repression

(Submitter supplied) As part of a study of the function of the C. elegans DREAM complex, here we have used ChIP-seq to analyze the patterns of histone variant HTZ-1/H2A.Z and various histone modifications in lin-35(n745) mutants. In addition, we have used RNA-seq to analyze gene expression in lin-35 and htz-1 mutants as compared with wild-type L3 larvae.
Organism:
Caenorhabditis elegans
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL13776 GPL13657
20 Samples
Download data: BW, XLSX
Series
Accession:
GSE62833
ID:
200062833
2.

Illumina Genome Analyzer IIx (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
570 Series
1460 Samples
Download data
Platform
Accession:
GPL13776
ID:
100013776
3.

Illumina HiSeq 2000 (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
447 Series
4585 Samples
Download data
Platform
Accession:
GPL13657
ID:
100013657
4.

Input DNA for ChIPs, lin-35 mutant extract IL5

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534083
ID:
301534083
5.

Input DNA for ChIPs, lin-35 mutant extract IL3

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534082
ID:
301534082
6.

ChIP-seq of H4ac (tetraacetyl) in lin-35 mutant, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534081
ID:
301534081
7.

ChIP-seq of H4ac (tetraacetyl) in lin-35 mutant, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534080
ID:
301534080
8.

ChIP-seq of H3K4me3 in lin-35 mutant, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534079
ID:
301534079
9.

ChiP-seq of H3K4me3 in lin-35 mutant, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534078
ID:
301534078
10.

ChiP-seq of HTZ-1 in lin-35 mutant, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534077
ID:
301534077
11.

ChiP-seq of HTZ-1 in lin-35 mutant, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534076
ID:
301534076
12.

ChIP-seq of H3K36me3 in wild-type, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534071
ID:
301534071
13.

ChIP-seq of H3K36me3 in wild-type, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13776
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534070
ID:
301534070
14.

RNA-seq in htz-1 mutants, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534089
ID:
301534089
15.

RNA-seq in htz-1 mutants, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534088
ID:
301534088
16.

RNA-seq in lin-35 mutants, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534087
ID:
301534087
17.

RNA-seq in lin-35 mutants, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534086
ID:
301534086
18.

RNA-seq in wild-type, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534085
ID:
301534085
19.

RNA-seq in wild-type, replicate 1

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data
Sample
Accession:
GSM1534084
ID:
301534084
20.

ChIP-seq of histone H3 in lin-35 mutant, replicate 2

Organism:
Caenorhabditis elegans
Source name:
L3 larvae
Platform:
GPL13657
Series:
GSE62833
Download data: BW
Sample
Accession:
GSM1534075
ID:
301534075
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Supplemental Content

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