GSE70766[Accession] - GEO DataSets

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Items: 14

Select item 2000707661.

Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells

(Submitter supplied) To define target genes of the intestine-restricted transcription factor (TF) CDX2 in intestinal stem cells, we performed chromatin immunoprecipitation coupled with high-throughput sequencing (ChIP-Seq). We used RNA-sequencing to profile gene expression changes during cell differentiation from mouse intestinal stem cells to mature villus cells, as well as genes perturbed in intestinal stem cells upon loss of Cdx2. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL19057 GPL13112
11 Samples

Download data: BED, BW, GTF, TXT

Series

Accession:: GSE70766

ID:: 200070766

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10275 Series
295680 Samples

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Platform

Accession:: GPL19057

ID:: 100019057

Select item 1000131123.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8348 Series
188708 Samples

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Platform

Accession:: GPL13112

ID:: 100013112

Select item 3018176954.

Control Villus biological rep 3

Organism:: Mus musculus

Source name:: Control mouse villus cells

Platform:: GPL19057
Series:: GSE70766

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Sample

Accession:: GSM1817695

ID:: 301817695

SRA Run Selector

Select item 3018176945.

Control Villus biological rep 2

Organism:: Mus musculus

Source name:: Control mouse villus cells

Platform:: GPL19057
Series:: GSE70766

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Sample

Accession:: GSM1817694

ID:: 301817694

SRA Run Selector

Select item 3018176936.

Control Villus biological rep 1

Organism:: Mus musculus

Source name:: Control mouse villus cells

Platform:: GPL19057
Series:: GSE70766

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Sample

Accession:: GSM1817693

ID:: 301817693

SRA Run Selector

Select item 3018177037.

ISC Input

Organism:: Mus musculus

Source name:: Control mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817703

ID:: 301817703

SRA Run Selector

Select item 3018177028.

CDX2 ISC ChIP-Seq

Organism:: Mus musculus

Source name:: Control mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

Download data: BED, BW

Sample

Accession:: GSM1817702

ID:: 301817702

SRA Run Selector

Select item 3018177019.

Cdx2-del ISC biological rep 3

Organism:: Mus musculus

Source name:: Cdx2-del mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817701

ID:: 301817701

SRA Run Selector

Select item 30181770010.

Cdx2-del ISC biological rep 2

Organism:: Mus musculus

Source name:: Cdx2-del mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817700

ID:: 301817700

SRA Run Selector

Select item 30181769911.

Cdx2-del ISC biological rep 1

Organism:: Mus musculus

Source name:: Cdx2-del mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817699

ID:: 301817699

SRA Run Selector

Select item 30181769812.

Control ISC biological rep 3

Organism:: Mus musculus

Source name:: Control mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817698

ID:: 301817698

SRA Run Selector

Select item 30181769713.

Control ISC biological rep 2

Organism:: Mus musculus

Source name:: Control mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

Download data

Sample

Accession:: GSM1817697

ID:: 301817697

SRA Run Selector

Select item 30181769614.

Control ISC biological rep 1

Organism:: Mus musculus

Source name:: Control mouse intestinal stem cells

Platform:: GPL13112
Series:: GSE70766

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Sample

Accession:: GSM1817696

ID:: 301817696

SRA Run Selector

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GSE70766[Accession] (14)
GEO DataSets
translation elongation factor 1-alpha, partial [Mucilago crustacea]
translation elongation factor 1-alpha, partial [Mucilago crustacea]
gi|2440757476|gb|WCO16276.1|

Protein
RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=C...
RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit
gi|118574253|sp|Q1EG05.1|CYB_GALPY

Protein
MAG: Acidimicrobiaceae bacterium TMED210, whole genome shotgun sequencing projec...
MAG: Acidimicrobiaceae bacterium TMED210, whole genome shotgun sequencing project
gi|1519749020|gb|NHJH00000000.2|NHJ 0000

Nucleotide
MAG: Candidatus Pelagibacter sp. TMED239, whole genome shotgun sequencing projec...
MAG: Candidatus Pelagibacter sp. TMED239, whole genome shotgun sequencing project
gi|1519729680|gb|NHKK00000000.2|NHK 0000

Nucleotide

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