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Items: 7

1.

HiC of Wild Type Neurospora crassa and mutants deficient in heterochromatin formation

(Submitter supplied) Eukaryotic genomes are organized into chromatin domains with distinct three-dimensional arrangements resulting from nucleic acid and protein factor interactions within the physical constraints of the nucleus. It is of obvious interest to determine interactions between various chromosomal regions defined by these nuclear constraints, and to identify important factors that limit the interactions. We used chromosome conformation capture (3C) followed by high-throughput sequencing (HiC) to improve our understanding of Neurospora crassa genome organization and to examine if known components of heterochromatin machinery influence nuclear organization. more...
Organism:
Neurospora crassa
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL20705
5 Samples
Download data: FASTA, GTF, TDF, TXT
Series
Accession:
GSE71024
ID:
200071024
2.

Illumina HiSeq 2500 (Neurospora crassa)

Organism:
Neurospora crassa
15 Series
117 Samples
Download data
Platform
Accession:
GPL20705
ID:
100020705
3.

NMF426-mCherry_CenH3_ChIPseq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20705
Series:
GSE71024
Download data: TDF, TXT
Sample
Accession:
GSM1825706
ID:
301825706
4.

N2108_dim-3_HiC

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL20705
Series:
GSE71024
Download data: TXT
Sample
Accession:
GSM1825705
ID:
301825705
5.

N5580_hpo_HiC

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL20705
Series:
GSE71024
Download data: TXT
Sample
Accession:
GSM1825704
ID:
301825704
6.

N3944_dim-5_HiC

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL20705
Series:
GSE71024
Download data: TXT
Sample
Accession:
GSM1825703
ID:
301825703
7.

NMF39_WildType_HiC

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL20705
Series:
GSE71024
Download data: TXT
Sample
Accession:
GSM1825702
ID:
301825702
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Supplemental Content

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