GSE71508[Accession] - GEO DataSets - NCBI

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Items: 8

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The SWI/SNF chromatin remodeling complex is required for lineage specific enhancer activity [MEF_RNA-seq]

(Submitter supplied) Genes encoding subunits of SWI/SNF (BAF) chromatin remodeling complexes are collectively altered in over 20% of all human malignancies, but the mechanisms by which these complexes alter chromatin to modulate transcription and control cell fate are poorly understood. Utilizing both loss-of-function and gain-of-function approaches, here we show that SWI/SNF complexes are preferentially targeted to distal enhancers and interact with p300 to regulate transcription via modulation of histone H3 lysine 27 acetylation. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13112
6 Samples

Download data: WIG

Series

Accession:: GSE71508

ID:: 200071508

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000131122.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8349 Series
188710 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3018359813.

RNA-seq_MEF_Smarcb1II

Organism:: Mus musculus

Source name:: MEF_Smarcb1

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835981

ID:: 301835981

SRA Run Selector

Select item 3018359804.

RNA-seq_MEF_Smarcb1I

Organism:: Mus musculus

Source name:: MEF_Smarcb1

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835980

ID:: 301835980

SRA Run Selector

Select item 3018359795.

RNA-seq_MEF_WTII

Organism:: Mus musculus

Source name:: MEF_WT

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835979

ID:: 301835979

SRA Run Selector

Select item 3018359786.

RNA-seq_MEF_Smarca4II

Organism:: Mus musculus

Source name:: MEF_Smarca4

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835978

ID:: 301835978

SRA Run Selector

Select item 3018359777.

RNA-seq_MEF_WTI

Organism:: Mus musculus

Source name:: MEF_WT

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835977

ID:: 301835977

SRA Run Selector

Select item 3018359768.

RNA-seq_MEF_Smarca4I

Organism:: Mus musculus

Source name:: MEF_Smarca4

Platform:: GPL13112
Series:: GSE71508 GSE71509

Download data: WIG

Sample

Accession:: GSM1835976

ID:: 301835976

SRA Run Selector

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GSE71508[Accession] (8)
GEO DataSets
Population genome of an uncultured Epulopiscium sp. from Naso elegans
Population genome of an uncultured Epulopiscium sp. from Naso elegans

biosample
MAG: Epulopiscium sp. AS2M-Bin001, whole genome shotgun sequencing project
MAG: Epulopiscium sp. AS2M-Bin001, whole genome shotgun sequencing project
gi|1150182766|gb|LNZM00000000.1|LNZ 0000

Nucleotide
MAG: Epulopiscium sp. Nele67-Bin002, whole genome shotgun sequencing project
MAG: Epulopiscium sp. Nele67-Bin002, whole genome shotgun sequencing project
gi|1150177130|gb|LNZP00000000.1|LNZ 0000

Nucleotide

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