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1.

Altered microRNA expression and pre-mRNA splicing events reveal new mechanisms associated with early stage Mycobacterium avium subspecies paratuberculosis infection

(Submitter supplied) The molecular regulatory mechanisms of host responses to Mycobacterium avium subsp. paratuberculosis (MAP) infection during the early subclinical stage are still not clear. In this study, surgically isolated ileal segments in newborn calves (n = 5) were used to establish in vivo MAP infection adjacent to an uninfected control intestinal compartment. RNA-seq was used to profile the whole transcriptome (mRNAs) and the microRNAome (miRNAs) of ileal tissues collected at one-month post-infection. more...
Organism:
Bos taurus
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL15749
20 Samples
Download data: TXT
Series
Accession:
GSE74394
ID:
200074394
2.

Illumina HiSeq 2000 (Bos taurus)

Platform
Accession:
GPL15749
ID:
100015749
3.

C5 mRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919499
ID:
301919499
4.

C4 mRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919498
ID:
301919498
5.

C3 mRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919497
ID:
301919497
6.

C2 mRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919496
ID:
301919496
7.

C1 mRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919495
ID:
301919495
8.

M5 mRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919494
ID:
301919494
9.

M4 mRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919493
ID:
301919493
10.

M3 mRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919492
ID:
301919492
11.

M2 mRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919491
ID:
301919491
12.

M1 mRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919490
ID:
301919490
13.

C5 microRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919489
ID:
301919489
14.

C4 microRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919488
ID:
301919488
15.

C3 microRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919487
ID:
301919487
16.

C2 microRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919486
ID:
301919486
17.

C1 microRNA

Organism:
Bos taurus
Source name:
Non-infected ileal tissues
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919485
ID:
301919485
18.

M5 microRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919484
ID:
301919484
19.

M4 microRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919483
ID:
301919483
20.

M3 microRNA

Organism:
Bos taurus
Source name:
MAP-infected ileal tissue
Platform:
GPL15749
Series:
GSE74394
Download data: TXT
Sample
Accession:
GSM1919482
ID:
301919482

Supplemental Content

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