GSE76174[Accession] - GEO DataSets - NCBI

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Select item 2000761741.

Cause and consequence of tethering a sub-TAD to different nuclear compartments

(Submitter supplied) Detailed genomic contact maps have revealed that chromosomes are composed of developmentally stable topologically associated domains (TADs) and more flexible sub-TADs. These domains reside in active and inactive nuclear compartments, but cause and consequence of compartmentalization are largely unknown. Here, we combined lacO/lacR binding platforms with allele-specific 4C technologies to track their precise position in the three-dimensional genome upon recruitment of NANOG, SUV39H1 or EZH2. more...

Organism:: Mus musculus

Type:: Other

Platforms:: GPL13112 GPL19057
45 Samples

Download data: WIG

Series

Accession:: GSE76174

ID:: 200076174

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

9719 Series
284124 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 1000131123.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8229 Series
187279 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3019758264.

chr11_LacR_Suv39h1_UT_subTAD_400Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975826

ID:: 301975826

SRA Run Selector

Select item 3019758255.

chr11_LacR_Suv39h1_UT_subTAD_335Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975825

ID:: 301975825

SRA Run Selector

Select item 3019758246.

chr11_LacR_Suv39h1_UT_subTAD_209Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975824

ID:: 301975824

SRA Run Selector

Select item 3019758237.

chr11_LacR_Suv39h1_UT_subTAD_80Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975823

ID:: 301975823

SRA Run Selector

Select item 3019758228.

chr11_LacR_Suv39h1_TA_subTAD_400Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975822

ID:: 301975822

SRA Run Selector

Select item 3019758219.

chr11_LacR_Suv39h1_TA_subTAD_335Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975821

ID:: 301975821

SRA Run Selector

Select item 30197582010.

chr11_LacR_Suv39h1_TA_subTAD_209Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975820

ID:: 301975820

SRA Run Selector

Select item 30197581911.

chr11_LacR_Suv39h1_TA_subTAD_80Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975819

ID:: 301975819

SRA Run Selector

Select item 30197581812.

chr11_LacR_Ezh2_UT_subTAD_400Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975818

ID:: 301975818

SRA Run Selector

Select item 30197581713.

chr11_LacR_Ezh2_UT_subTAD_335Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975817

ID:: 301975817

SRA Run Selector

Select item 30197581614.

chr11_LacR_Ezh2_UT_subTAD_209Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975816

ID:: 301975816

SRA Run Selector

Select item 30197581515.

chr11_LacR_Ezh2_UT_subTAD_80Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975815

ID:: 301975815

SRA Run Selector

Select item 30197581416.

chr11_LacR_Ezh2_TA_subTAD_400Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975814

ID:: 301975814

SRA Run Selector

Select item 30197581317.

chr11_LacR_Ezh2_TA_subTAD_335Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975813

ID:: 301975813

SRA Run Selector

Select item 30197581218.

chr11_LacR_Ezh2_TA_subTAD_209Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975812

ID:: 301975812

SRA Run Selector

Select item 30197581119.

chr11_LacR_Ezh2_TA_subTAD_80Kb_vp_4C-Seq_R1

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975811

ID:: 301975811

SRA Run Selector

Select item 30197581020.

chr11_LacR_4C-Seq_R4

Organism:: Mus musculus

Source name:: LacO transgenic embryonic stem cells

Platform:: GPL13112
Series:: GSE76174

Download data: WIG

Sample

Accession:: GSM1975810

ID:: 301975810

SRA Run Selector

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