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Items: 1 to 20 of 82

1.

Dynamic epigenomic landscapes during early lineage specification in mouse embryos

(Submitter supplied) In mammals, all somatic development originates from lineage segregation in early embryos. However, the dynamics of transcriptomes and epigenomes in concert with initial cell fate commitment remains poorly characterized. Here, we report comprehensive investigation of transcriptomes and base-resolution methylomes for early lineages in peri- and postimplantation mouse embryos. We found allele- and lineage-specific de novo methylation at CG and CH sites, leading to differential methylation between embryonic and extraembryonic lineages at promoters of lineage regulators, gene bodies, and DNA methylation valleys. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other
Platforms:
GPL21273 GPL17021 GPL18480
78 Samples
Download data: TXT
Series
Accession:
GSE76505
ID:
200076505

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2.

HiSeq X Ten (Mus musculus)

Organism:
Mus musculus
1805 Series
40011 Samples
Download data
Platform
Accession:
GPL21273
ID:
100021273

3.

Illumina HiSeq 1500 (Mus musculus)

Organism:
Mus musculus
595 Series
10993 Samples
Download data
Platform
Accession:
GPL18480
ID:
100018480

4.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
11084 Series
299096 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

5.

RNA-seq IVC+2d rep2

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2881087
ID:
302881087

SRA Run Selector

6.

RNA-seq IVC+2d rep1

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2881086
ID:
302881086

SRA Run Selector

7.

RNA-seq IVC+1d rep2

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2881085
ID:
302881085

SRA Run Selector

8.

RNA-seq IVC+1d rep1

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2881084
ID:
302881084

SRA Run Selector

9.

RNA-seq IVC+4d VE rep2

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051226
ID:
302051226

SRA Run Selector

10.

RNA-seq IVC+4d VE rep1

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051225
ID:
302051225

SRA Run Selector

11.

RNA-seq IVC+4d Epi rep2

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051224
ID:
302051224

SRA Run Selector

12.

RNA-seq IVC+4d Epi rep1

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051223
ID:
302051223

SRA Run Selector

13.

MethylC-seq mESC bulk TT2 cell line

Organism:
Mus musculus
Source name:
Embryonic stem cell
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051222
ID:
302051222

SRA Run Selector

14.

STEM-seq mESC (10ng)

Organism:
Mus musculus
Source name:
Embryonic stem cell
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051221
ID:
302051221

SRA Run Selector

15.

STEM-seq mESC (100ng)

Organism:
Mus musculus
Source name:
Embryonic stem cell
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051220
ID:
302051220

SRA Run Selector

16.

STEM-seq E7.5Mes rep3

Organism:
Mus musculus
Source name:
postimplantation embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2704273
ID:
302704273

SRA Run Selector

17.

MethylC-seq mESC bulk R1 cell line

Organism:
Mus musculus
Source name:
Embryonic stem cell
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051218
ID:
302051218

SRA Run Selector

18.

STEM-seq E7.5PS rep3

Organism:
Mus musculus
Source name:
postimplantation embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2704272
ID:
302704272

SRA Run Selector

19.

STEM-seq IVC+4d VE rep2

Organism:
Mus musculus
Source name:
In vitro culture embryo
Platform:
GPL18480
Series:
GSE76505
Download data
Sample
Accession:
GSM2051217
ID:
302051217

SRA Run Selector

20.

STEM-seq E7.5Ect rep3

Organism:
Mus musculus
Source name:
Postimplantation embryo
Platform:
GPL17021
Series:
GSE76505
Download data
Sample
Accession:
GSM2704271
ID:
302704271

SRA Run Selector

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