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Items: 1 to 20 of 21

1.

ChIP-seq-based analysis of i) K27me3 promoter coverage and ii) enhancer elements in neuroblastoma cell lines

(Submitter supplied) To investigate whether a set of differentially methylated/expressed genes, identified in neuroblastomas of differential outcome, co-localizes with K27me3 marks or enhancer elements, we performed H3K4me3, H3K4me1, H3K27ac and H3K27me3 ChIP seq in neuroblastoma cell lines.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11154
19 Samples
Download data: TDF
Series
Accession:
GSE80197
ID:
200080197

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10550 Series
183623 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

IMR5-75-shMYCN-MYCN low input DNA

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN low
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120717
ID:
302120717

SRA Run Selector

4.

IMR5-75-shMYCN-MYCN low H3K27me3_ChIP_seq

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN low
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120716
ID:
302120716

SRA Run Selector

5.

IMR5-75-shMYCN-MYCN high input DNA

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN high
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120715
ID:
302120715

SRA Run Selector

6.

IMR5-75-shMYCN-MYCN high H3K27me3_ChIP_seq

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN high
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120714
ID:
302120714

SRA Run Selector

7.

IMR5-75-shMYCN-MYCN high H3K27ac_ChIP_seq

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN high
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120713
ID:
302120713

SRA Run Selector

8.

IMR5-75-shMYCN-MYCN high H3K4me1_ChIP_seq

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN high
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120712
ID:
302120712

SRA Run Selector

9.

IMR5-75-shMYCN-MYCN high H3K4me3_ChIP_seq

Organism:
Homo sapiens
Source name:
IMR5-75-shMYCN-MYCN high
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120711
ID:
302120711

SRA Run Selector

10.

SH-SY5Y-MYCN-ON input DNA

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-ON
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120710
ID:
302120710

SRA Run Selector

11.

SH-SY5Y-MYCN-ON H3K27me3_ChIP_seq

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-ON
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120709
ID:
302120709

SRA Run Selector

12.

SH-SY5Y-MYCN-OFF input DNA

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-OFF
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120708
ID:
302120708

SRA Run Selector

13.

SH-SY5Y-MYCN-OFF H3K27me3_ChIP_seq

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-OFF
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120707
ID:
302120707

SRA Run Selector

14.

SH-SY5Y-MYCN-OFF H3K27ac_ChIP_seq

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-OFF
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120706
ID:
302120706

SRA Run Selector

15.

SH-SY5Y-MYCN-OFF H3K4me1_ChIP_seq

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-OFF
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120705
ID:
302120705

SRA Run Selector

16.

SH-SY5Y-MYCN-OFF H3K4me3_ChIP_seq

Organism:
Homo sapiens
Source name:
SH-SY5Y-MYCN-OFF
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120704
ID:
302120704

SRA Run Selector

17.

Be(2)-C input DNA

Organism:
Homo sapiens
Source name:
Be(2)-C
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120703
ID:
302120703

SRA Run Selector

18.

Be(2)-C H3K27me3_ChIP_seq

Organism:
Homo sapiens
Source name:
Be(2)-C
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120702
ID:
302120702

SRA Run Selector

19.

Be(2)-C H3K27ac_ChIP_seq

Organism:
Homo sapiens
Source name:
Be(2)-C
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120701
ID:
302120701

SRA Run Selector

20.

Be(2)-C H3K4me1_ChIP_seq

Organism:
Homo sapiens
Source name:
Be(2)-C
Platform:
GPL11154
Series:
GSE80197
Download data: TDF
Sample
Accession:
GSM2120700
ID:
302120700

SRA Run Selector

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db=gds|term=GSE80197[Accession]|query=9|qty=2|blobid=MCID_6733de0c3ec0a11b447ddc2d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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