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Items: 20

1.

Evolutionary Principles Predict 3D Chromatin Organization

(Submitter supplied) TADs, CTCF loop domains, and A/B compartments have been identified as important structural and functional components of 3D chromatin organization, yet the relationship between these features is not well understood. Using high-resolution Hi-C and HiChIP we show that Drosophila chromatin is organized into domains we term compartmental domains that correspond precisely with A/B compartments at high resolution. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL13304
18 Samples
Download data: BW, HIC
Series
Accession:
GSE89244
ID:
200089244
2.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
906 Series
18306 Samples
Download data
Platform
Accession:
GPL13304
ID:
100013304
3.

H3K27me3_HiChIP_3

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2583730
ID:
302583730
4.

H3K27ac_HiChIP_2

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2583729
ID:
302583729
5.

Triptolide_ATACseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2583728
ID:
302583728
6.

DMSO_ATACseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2583727
ID:
302583727
7.

H2Av_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487552
ID:
302487552
8.

H2Bub_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487551
ID:
302487551
9.

H3.3_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487550
ID:
302487550
10.

H4K20me1_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487549
ID:
302487549
11.

H4K16ac_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487548
ID:
302487548
12.

H3K9me3_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487547
ID:
302487547
13.

H3K36me3_ChIPseq

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: BW
Sample
Accession:
GSM2487546
ID:
302487546
14.

Pol2Ser2_HiChIP_2

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2487545
ID:
302487545
15.

H3K27me3_HiChIP_2

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2487544
ID:
302487544
16.

H3K27me3_HiChIP_1

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2487543
ID:
302487543
17.

H3K27ac_HiChIP

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2487542
ID:
302487542
18.

PolII_ChIAPET

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2362846
ID:
302362846
19.

Pol2Ser2_HiChIP

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2362845
ID:
302362845
20.

CP190_HiChIP

Organism:
Drosophila melanogaster
Source name:
Kc167
Platform:
GPL13304
Series:
GSE89244
Download data: HIC
Sample
Accession:
GSM2362844
ID:
302362844
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Supplemental Content

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