GSE93090[Accession] - GEO DataSets - NCBI

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Items: 17

Select item 2000930901.

Role of remodeling and spacing factor 1 in histone H2A ubiquitination mediated gene silencing

(Submitter supplied) Posttranslational modification of histones plays important roles in regulating chromatin-based nuclear processes. Histone H2A ubiquitination (H2Aub) is a prevalent modification and has been primarily linked to gene silencing; however, the mechanism by which H2Aub represses gene expression remains largely unclear. Here we report the identification of RSF1 (remodeling and spacing factor 1), a subunit of the RSF (remodeling and spacing factor) complex, as a novel H2Aub binding protein which mediates the repressive function of H2Aub on gene expression. more...

Organism:: Homo sapiens; Mus musculus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL20301 GPL21103 GPL9250
13 Samples

Download data: TXT, WIG

Series

Accession:: GSE93090

ID:: 200093090

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000211032.

Illumina HiSeq 4000 (Mus musculus)

Organism:: Mus musculus

6595 Series
141800 Samples

Platform

Accession:: GPL21103

ID:: 100021103

Select item 1000203013.

Illumina HiSeq 4000 (Homo sapiens)

Organism:: Homo sapiens

8486 Series
194941 Samples

Platform

Accession:: GPL20301

ID:: 100020301

Select item 1000092504.

Illumina Genome Analyzer II (Mus musculus)

Organism:: Mus musculus

802 Series
5962 Samples

Platform

Accession:: GPL9250

ID:: 100009250

Select item 3025384695.

mESC_Flag_ChIP-seq

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL9250
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2538469

ID:: 302538469

SRA Run Selector

Select item 3024435416.

mESC_Rsf1_ubH2Adel_ChIP-seq_rep2

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL9250
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443541

ID:: 302443541

SRA Run Selector

Select item 3024435407.

mESC_Rsf1_ubH2Adel_ChIP-seq_rep1

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL9250
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443540

ID:: 302443540

SRA Run Selector

Select item 3024435398.

mESC_Rsf1_ChIP-seq

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL9250
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443539

ID:: 302443539

SRA Run Selector

Select item 3024435459.

mESC_control_Mnase-seq

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443545

ID:: 302443545

SRA Run Selector

Select item 30244354410.

mESC_Rsf1_KO_MNase-seq_rep2

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443544

ID:: 302443544

SRA Run Selector

Select item 30244354311.

mESC_Rsf1_KO_MNase-seq_rep1

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Download data: WIG

Sample

Accession:: GSM2443543

ID:: 302443543

SRA Run Selector

Select item 30244353812.

mESC_control_RNA-seq

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Sample

Accession:: GSM2443538

ID:: 302443538

SRA Run Selector

Select item 30244353713.

mESC_Rsf1_KO_RNA-seq_rep2

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Sample

Accession:: GSM2443537

ID:: 302443537

SRA Run Selector

Select item 30244353614.

mESC_Rsf1_KO_RNA-seq_rep1

Organism:: Mus musculus

Source name:: mouse embryonic stem cell

Platform:: GPL21103
Series:: GSE93090

Sample

Accession:: GSM2443536

ID:: 302443536

SRA Run Selector

Select item 30244353515.

HeLa_control_RNA-seq

Organism:: Homo sapiens

Source name:: human HeLa cell

Platform:: GPL20301
Series:: GSE93090

Sample

Accession:: GSM2443535

ID:: 302443535

SRA Run Selector

Select item 30244353416.

HeLa_RNF2_KD_RNA-seq

Organism:: Homo sapiens

Source name:: human HeLa cell

Platform:: GPL20301
Series:: GSE93090

Sample

Accession:: GSM2443534

ID:: 302443534

SRA Run Selector

Select item 30244353317.

HeLa_RSF1_KD_RNA-seq

Organism:: Homo sapiens

Source name:: human HeLa cell

Platform:: GPL20301
Series:: GSE93090

Sample

Accession:: GSM2443533

ID:: 302443533

SRA Run Selector

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